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scnpilot_solids2_trim150_scaffold_539_17

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(18293..19723)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7R9_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 475.0
  • Bit_score: 542
  • Evalue 5.60e-151
  • rbh
two component, sigma54 specific, transcriptional regulator, Fis family; K07713 two-component system, NtrC family, response regulator HydG similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 475.0
  • Bit_score: 542
  • Evalue 1.80e-151
  • rbh
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADY53324.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 475.0
  • Bit_score: 542
  • Evalue 7.80e-151

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Taxonomy

Pseudopedobacter saltans → Pseudopedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1431
ATGAAGAAGAAAATACTTATCATTGATGATGATTTTGATATGTGTACTCTGTTGAGCCGTTACCTTGATAAGAAAGGTTATGAAACTTCTACGGCTCACAACGGATCCAAAGGCCTCGCTAAATTCAATGAAGAACATTTTGATATTGTGCTTTGTGATTTCCGTTTGGGTGATAAGGATGGAAAGGATGTGCTATCGAAAATAAAACAGGCAAAGCCTAAAACTATCGTGATCATTATCACGGGTTACTCAGATATTAAGGTTGCCGTAGATGTTATCAAGATGGGGGCCTTCGATTATATTACCAAGCCGCTTATTCCCGACGAAGTGATCAACGTAATTGAAAAATCCCTGGCAAGCCCTGTATCTGAGGCAGTTCAACCTTCTCTGAAACAGCCCGAAGAAATTAAACAAAAAAGAAGAAGTTATGAACTATCAGTGAATGATGAATATCTTGTAGGGCAGGATGAAAAGACAACTAAAATTTATAAGCAAATAGAAATAGTAGCCCCTACCAACTACAGCGTTATTTTATATGGCGAAAGTGGAACAGGAAAGGAAGTAATTGCAAAAACCATTCATGACTATAGTAACCGCAAGGGTAAACCTTTCATAGCTATGGATTGCGGCACTTTATCAAAAGAGCTATCCGGGAGTGAGCTTTTCGGACATGTAAAGGGAGCCTTCACCGGAGCAGTAACTGATAAGGAAGGCCATTTTGAAATTGCCAATGGCGGTACATTATTTTTAGATGAAGTATCTAACCTGCCTAAAGATGTACAGGCATCTTTATTAAGAGTAATACAGGAACGAAAATACAAAAGAGTAGGAGGCACTAAGGAAATGGATGTGGATGTCAGGATCATTGTTGCTTCCAATGAAAATTTACAGGAAGCCTATCAGAAAGGAAAATTCCGGGAAGACCTTTATCACCGGTTTAATGAGTTTTCAATAAATCTTCCTCCGCTTCGCAATAGAAAAGAAGATATTCCATTGTTTGCACAATTTTTTCTCGACAGAACCAATGCTGAATTAGGTAAAAATATTGAAGGCTATGAAGGAGATGTAGAAGAAATGTTTTTACACTATGCATGGCCCGGAAATTTAAGAGAGTTTAGAAATGTGGTGCGCCGCGCCGTATTGCTGACGCCATCCGGAAAAATAAATTCCAGTGTTTTGCCATGGGAGATTACTCAATCTTCCCATCAGTATGAGCAGCCAATCAATGGAAATCACCAGGAACACATTCCTGCCACAACTAATGCTCACTTTAAAGAAGTTGACCTGAAAGATGCAGCAGCTAAGGCAGAATATGAAACCATAATGAATGTTTTAAAAGAAGTAAACTTCAATAAAACCAAAGCTGCTGAAATTTTAAAAATTGACCGGAAAACGCTTTATAACAAAATCAAAATTTACGAGTCGCTATAA
PROTEIN sequence
Length: 477
MKKKILIIDDDFDMCTLLSRYLDKKGYETSTAHNGSKGLAKFNEEHFDIVLCDFRLGDKDGKDVLSKIKQAKPKTIVIIITGYSDIKVAVDVIKMGAFDYITKPLIPDEVINVIEKSLASPVSEAVQPSLKQPEEIKQKRRSYELSVNDEYLVGQDEKTTKIYKQIEIVAPTNYSVILYGESGTGKEVIAKTIHDYSNRKGKPFIAMDCGTLSKELSGSELFGHVKGAFTGAVTDKEGHFEIANGGTLFLDEVSNLPKDVQASLLRVIQERKYKRVGGTKEMDVDVRIIVASNENLQEAYQKGKFREDLYHRFNEFSINLPPLRNRKEDIPLFAQFFLDRTNAELGKNIEGYEGDVEEMFLHYAWPGNLREFRNVVRRAVLLTPSGKINSSVLPWEITQSSHQYEQPINGNHQEHIPATTNAHFKEVDLKDAAAKAEYETIMNVLKEVNFNKTKAAEILKIDRKTLYNKIKIYESL*