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scnpilot_solids2_trim150_scaffold_1564_6

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(5809..6297)

Top 3 Functional Annotations

Value Algorithm Source
endoribonuclease L-PSP n=1 Tax=Variovorax paradoxus RepID=UPI000372F7CC similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 159.0
  • Bit_score: 252
  • Evalue 3.90e-64
Variovorax paradoxus strain MEDvA23 contig_48, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28405.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 159.0
  • Bit_score: 252
  • Evalue 3.20e-64
endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 159.0
  • Bit_score: 249
  • Evalue 8.00e-64

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGGCAAAGATCGAAGCGAAACTGGCGGCCCTTGGGCTCAGCTTGCCACCGCCGCCCCAGCCACCACCCGGGATTGTCCTTCCCTTCCGGTTTGTGCGGATCCTCGGCAACCGGGTCCTCATCTCCGGTCACGGACCGCAGAATCCGGATGGTTCCTTTGCGGCACCGCTCGGCAAGCTCGGACGCGAAGTGTCGCTCGAACAGGGCTACACCGCCGCCCGCCTCGTTGCGCTTTCCATCCTCGGCAGCCTCAAGCGTGCACTTGGCGATCTCGACCGCATTGCGGCCTGGTCACGTGTGCTCGGCATGGTCAATTCGGCGCCTGGCTTCAACCAGCAACCGAATGTCATCAACGGATTCTCCGACCTCATCCTGGAACTCTACGGTCCCGACGCAGGCGCCCACAGCCGCAGCGCCGTGGGTCTTGCCGAGCTTCCGTTCAATATCCCGGTGGAGATCGAGGGCGAAGTCGAACTCGTGCGGACTTAG
PROTEIN sequence
Length: 163
MAKIEAKLAALGLSLPPPPQPPPGIVLPFRFVRILGNRVLISGHGPQNPDGSFAAPLGKLGREVSLEQGYTAARLVALSILGSLKRALGDLDRIAAWSRVLGMVNSAPGFNQQPNVINGFSDLILELYGPDAGAHSRSAVGLAELPFNIPVEIEGEVELVRT*