ggKbase home page

scnpilot_solids2_trim150_scaffold_2401_1

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 2..205

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI000380E43D similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 51.0
  • Bit_score: 90
  • Evalue 8.30e-16
Putative conjugal transfer protein trbI {ECO:0000313|EMBL:KJX85224.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 51.0
  • Bit_score: 88
  • Evalue 3.40e-15
trbI; conjugal transfer protein TrbI; K03195 type IV secretion system protein VirB10 similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 51.0
  • Bit_score: 87
  • Evalue 1.70e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ACCCTGGGCCAACAGCTTGGGCGCGTGATCACGCAGATGATCTCGAAGAACCTGAATATTGCGCCAACACTTGAAATCCGCCCGGGCTACCGCTTCAACATCACGGTGACGAAGGACATGGTCCTTGCCCGGCCATACCAGGCTTTCGACTACAAGGGAGCAGACTCGAATGGAAATACGCCGAATGAAAATACGAATGGTTAA
PROTEIN sequence
Length: 68
TLGQQLGRVITQMISKNLNIAPTLEIRPGYRFNITVTKDMVLARPYQAFDYKGADSNGNTPNENTNG*