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scnpilot_solids1_trim150_scaffold_1038_25

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: 21884..22486

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 200.0
  • Bit_score: 388
  • Evalue 8.00e-105
3-isopropylmalate dehydratase large subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXY0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 200.0
  • Bit_score: 388
  • Evalue 5.70e-105
3-isopropylmalate dehydratase, large subunit similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 200.0
  • Bit_score: 377
  • Evalue 2.40e-102

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
TTGCGCAGCGACGACGGCGCGCGATACGACCGCGAGGTGCGCATCGACGCCGGCGCGGTGAAACCCACCGTCACCTACGGCACCCATCCGGGCATGGCGATCGCGATGGACGCGCCGGTACCAGCGGCGACCAATGCGCAGGAACGCCGCGCGCTCGACTACATGCAGAGCACGCCCGGCCAGCCGATGCAGGGCACGCCGGTCGACGTCGTGTTCGTCGGCAGCTGCACCAACTCGCGCCTGTCCGACCTGCGCGAAGCGGCACGCGTGCTGCACGGCCGACGCATCGCGCAAGGTGTACGCATGCTGGTGGTGCCCGGTTCCGAGGCGGTGCGGCGCGACGCCGAGCGCGAAGGCCTGCACCACGTGTTCACCGCCGCCGGCGCCGAGTGGCGCGTGCCCGGCTGCTCGATGTGCATCGCGATGAACGGCGACCTGGCGCAGCCGGGCCAGCTGGTGGTGAGCACCTCCAACCGCAACTTCGAAGGCCGCCAGGGCAAGGGCGCACGCACCGTGCTGGCCAGCCCGGCCACCGCCGCCGCATCGGCGATCGCCGGGCGCATCGCCGATCCGCGCGAGTACCTGGTGGAAGTGGCGGCATGA
PROTEIN sequence
Length: 201
LRSDDGARYDREVRIDAGAVKPTVTYGTHPGMAIAMDAPVPAATNAQERRALDYMQSTPGQPMQGTPVDVVFVGSCTNSRLSDLREAARVLHGRRIAQGVRMLVVPGSEAVRRDAEREGLHHVFTAAGAEWRVPGCSMCIAMNGDLAQPGQLVVSTSNRNFEGRQGKGARTVLASPATAAASAIAGRIADPREYLVEVAA*