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scnpilot_solids1_trim150_scaffold_937_23

Organism: SCNPILOT_SOLID_1_TRIM150_Hydrogenophilales_64_96

partial RP 5 / 55 BSCG 5 / 51 ASCG 6 / 38
Location: comp(23159..23581)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B45C6 similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 139.0
  • Bit_score: 255
  • Evalue 2.40e-65
carbamoyl-phosphate synthase L chain, ATP-binding; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 139.0
  • Bit_score: 254
  • Evalue 1.70e-65
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 139.0
  • Bit_score: 254
  • Evalue 7.40e-65

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATCGAGCCGGACCCGGCGACGCTGGCGGTCAAGATGGAAATGCCGGAAGACAAGATCCGCAAGATCATGAAGATCGCCAAGGAACCGATCTCGATGGAGACGCCGATCGGCGACGACGAGGATTCGCATCTGGGCGATTTCATCGAGGATTCCAGTACGCTCTCTCCCGACGATTCCGCGATCTACGCCAACCTGCGCGACGCCACCCGCGAAGTGCTCGACAGTCTGACCTCGCGCGAAGCCAAGGTACTGCGCATGCGCTTCGGCATCGAAATGAACACCGACCATACGCTGGAAGAAGTCGGCAAACAGTTCGACGTGACGCGCGAGCGCATTCGCCAGATCGAGGCCAAGGCCTTGCGCAAGCTGCGCCATCCGACCCGCTCACCGGCCTGTGCGGGCAGCATATTTTCGGGTCTGTAG
PROTEIN sequence
Length: 141
IEPDPATLAVKMEMPEDKIRKIMKIAKEPISMETPIGDDEDSHLGDFIEDSSTLSPDDSAIYANLRDATREVLDSLTSREAKVLRMRFGIEMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPTRSPACAGSIFSGL*