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scnpilot_solids2_trim150_scaffold_2830

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2830_1
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(96..1151)
-----------------
DNA (1056bp)
protein (352aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FB0709 rbh
Multidrug resistance protein MdtL {ECO:0000313|EMBL:KJL28301.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
putative Permease of the major facilitator superfamily MFS_1 rbh
scnpilot_solids2_trim150_scaffold_2830_2
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1148..1489)
-----------------
DNA (342bp)
protein (114aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F79029
ArsR family transcriptional regulator {ECO:0000313|EMBL:KDA07042.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
ArsR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_2830_3
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1573..2883
-----------------
DNA (1311bp)
protein (437aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C60D8 rbh
Flavoprotein {ECO:0000313|EMBL:EYT58230.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
putative oxidoreductase rbh
scnpilot_solids2_trim150_scaffold_2830_4
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3007..3984
-----------------
DNA (978bp)
protein (326aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
trxB; thioredoxin reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] rbh
Thioredoxin reductase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B3B6_9MICO rbh
scnpilot_solids2_trim150_scaffold_2830_5
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3981..4307
-----------------
DNA (327bp)
protein (109aa)
Thioredoxin n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A1W1_9MICO
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
trxA; thioredoxin; K03671 thioredoxin 1
scnpilot_solids2_trim150_scaffold_2830_6
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4304..5398
-----------------
DNA (1095bp)
protein (365aa)
Arsenical-resistance protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ALE7_9MICO rbh
Arsenical-resistance protein {ECO:0000313|EMBL:EPD83037.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
arsB; arsenite export protein; K03325 arsenite transporter, ACR3 family rbh
scnpilot_solids2_trim150_scaffold_2830_7
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5395..6393
-----------------
DNA (999bp)
protein (333aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A2U5_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD83036.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
arsR, arsC; putative transcriptional regulator/arsenate reductase
scnpilot_solids2_trim150_scaffold_2830_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6415..6819
-----------------
DNA (405bp)
protein (135aa)
Arsenate reductase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A8Z8_9MICO
Arsenate reductase {ECO:0000313|EMBL:EPD83035.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
arsC; arsenate reductase
scnpilot_solids2_trim150_scaffold_2830_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6870..7184)
-----------------
DNA (315bp)
protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL37350.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
scnpilot_solids2_trim150_scaffold_2830_10
Corynebacterium casei, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7234..7953)
-----------------
DNA (720bp)
protein (240aa)
Putative transporter n=1 Tax=Corynebacterium casei UCMA 3821 RepID=G7HYV1_9CORY rbh
Cation efflux family protein {ECO:0000313|EMBL:AHI20436.1}; TaxID=1285583 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium casei LMG S-19264.;"
integral membrane protein rbh
scnpilot_solids2_trim150_scaffold_2830_11
Corynebacterium falsenii, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7950..8309)
-----------------
DNA (360bp)
protein (120aa)
ArsR family transcriptional regulator n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI000362D65E
ArsR family transcriptional regulator {ECO:0000313|EMBL:AHI02813.1}; TaxID=1451189 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium falsenii DSM 44353.;"
ArsR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_2830_12
unknown

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8485..9039
-----------------
DNA (555bp)
protein (185aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2830_13
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8907..9308)
-----------------
DNA (402bp)
protein (134aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI0003623350
Uncharacterized protein {ECO:0000313|EMBL:KJL28820.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids2_trim150_scaffold_2830_14
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9302..10150)
-----------------
DNA (849bp)
protein (283aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000314E59F rbh
Calcineurin-like phosphoesterase superfamily domain protein {ECO:0000313|EMBL:KJL25033.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2830_15
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10796..11026
-----------------
DNA (231bp)
protein (77aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L6F1_9MICO
Transcriptional regulator, XRE family {ECO:0000313|EMBL:CDJ99376.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_2830_16
unknown

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11091..11648
-----------------
DNA (558bp)
protein (186aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2830_17
Gordonia paraffinivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11834..12139
-----------------
DNA (306bp)
protein (102aa)
Putative transposase n=1 Tax=Gordonia paraffinivorans NBRC 108238 RepID=M3V7Q0_9ACTO
Putative transposase {ECO:0000313|EMBL:GAC86327.1}; TaxID=1223543 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
transposase
scnpilot_solids2_trim150_scaffold_2830_18
Gordonia paraffinivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12136..13011
-----------------
DNA (876bp)
protein (292aa)
Putative transposase n=1 Tax=Gordonia paraffinivorans NBRC 108238 RepID=M3VGV6_9ACTO rbh
Putative transposase {ECO:0000313|EMBL:GAC86328.1}; TaxID=1223543 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
transposase subunit
scnpilot_solids2_trim150_scaffold_2830_19
unknown

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comp(13131..13520)
-----------------
DNA (390bp)
protein (130aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2830_20
unknown

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comp(13560..13727)
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2830_21
unknown

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comp(13839..13919)
-----------------
DNA (81bp)
protein (27aa)

This feature has no annotations

Displaying 21 items

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