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scnpilot_solids2_trim150_scaffold_207

Search features with annotation key words

Displaying items 1-30 of 239 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_207_1
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(389..862)
-----------------
DNA (474bp)
protein (158aa)
MarR family transcriptional regulator n=1 Tax=Glaciibacter superstes RepID=UPI0003B2E30B
MarR family transcriptional regulator {ECO:0000313|EMBL:ETK31420.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
putative MarR-family transcriptional regulator
scnpilot_solids2_trim150_scaffold_207_2
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

957..2069
-----------------
DNA (1113bp)
protein (371aa)
luciferase n=1 Tax=Glaciibacter superstes RepID=UPI0003B67EAB rbh
Putative luciferase protein {ECO:0000313|EMBL:CCH19591.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
oxidoreductase, LLM family
scnpilot_solids2_trim150_scaffold_207_3
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2101..2784
-----------------
DNA (684bp)
protein (228aa)
Putative NADP oxidoreductase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L6Z6_9ACTO
Putative NADP oxidoreductase {ECO:0000313|EMBL:CCH19593.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
coenzyme F420-dependent NADP oxidoreductase; K06988
scnpilot_solids2_trim150_scaffold_207_4
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(2896..3201)
-----------------
DNA (306bp)
protein (102aa)
30S ribosomal protein S14 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KA47_9MICO
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rpsN; ribosomal protein S14; K02954 small subunit ribosomal protein S14
scnpilot_solids2_trim150_scaffold_207_5
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3205..3375)
-----------------
DNA (171bp)
protein (57aa)
50S ribosomal protein L33 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K0H7_9MICO
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
rpmG; ribosomal protein L33; K02913 large subunit ribosomal protein L33
scnpilot_solids2_trim150_scaffold_207_6
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3375..3611)
-----------------
DNA (237bp)
protein (79aa)
50S ribosomal protein L28 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KAW5_9MICO
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rpmB; ribosomal protein L28; K02902 large subunit ribosomal protein L28
scnpilot_solids2_trim150_scaffold_207_7

Not on your lists

comp(3759..4571)
-----------------
DNA (813bp)
protein (271aa)
maltose ABC transporter permease n=1 Tax=Glaciibacter superstes RepID=UPI0003B40B16 rbh
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:AGU11911.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
ABC transporter, permease protein, probably xylobiose porter
scnpilot_solids2_trim150_scaffold_207_8

Not on your lists

comp(4568..5527)
-----------------
DNA (960bp)
protein (320aa)
glycerol-3-phosphate ABC transporter permease n=1 Tax=Glaciibacter superstes RepID=UPI0003B4FD7C rbh
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:AGU11912.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
putative ABC transporter permease; K10118 multiple sugar transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_207_9
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5524..6789)
-----------------
DNA (1266bp)
protein (422aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B4A6B9 rbh
putative ABC transporter substrate-binding protein; K10117 multiple sugar transport system substrate-binding protein rbh
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAK34533.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
scnpilot_solids2_trim150_scaffold_207_10
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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6980..8188
-----------------
DNA (1209bp)
protein (403aa)
Oxidoreductase n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2K102_STRHJ rbh
oxidoreductase rbh
Oxidoreductase {ECO:0000313|EMBL:AEY93431.1}; TaxID=1133850 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
scnpilot_solids2_trim150_scaffold_207_11
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8178..9188
-----------------
DNA (1011bp)
protein (337aa)
Transcriptional regulator, LacI family n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0K0D8_ARTS2 rbh
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ABK04758.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
scnpilot_solids2_trim150_scaffold_207_12
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9243..9932)
-----------------
DNA (690bp)
protein (230aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
3-methyladenine DNA glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCX0_9MICO rbh
scnpilot_solids2_trim150_scaffold_207_13
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9949..11778)
-----------------
DNA (1830bp)
protein (610aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEV3_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJQ52892.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_207_14
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(11768..12553)
-----------------
DNA (786bp)
protein (262aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000376C377 rbh
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_207_15
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12546..13589)
-----------------
DNA (1044bp)
protein (348aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E465EC rbh
Permease {ECO:0000313|EMBL:EYT60521.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
permease; K07089
scnpilot_solids2_trim150_scaffold_207_16
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13586..13999)
-----------------
DNA (414bp)
protein (138aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A975E
Zinc uptake regulation protein {ECO:0000313|EMBL:KJL30199.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
fur; Fe2+/Zn2+ uptake regulation proteins; K03711 Fur family transcriptional regulator, ferric uptake regulator
scnpilot_solids2_trim150_scaffold_207_17
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14329..15747)
-----------------
DNA (1419bp)
protein (473aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003767EA9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KDA05082.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
cell division initiation protein rbh
scnpilot_solids2_trim150_scaffold_207_18
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15906..16760)
-----------------
DNA (855bp)
protein (285aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030B1D11 rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM72701.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
znuB; ABC transporter permease; K02075 zinc/manganese transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_207_19
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16757..17623)
-----------------
DNA (867bp)
protein (289aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEU5_9MICO rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDA05070.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
fhuC; Mn/Zn ABC transporter ATPase; K02074 zinc/manganese transport system ATP-binding protein rbh
scnpilot_solids2_trim150_scaffold_207_20
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17620..18564)
-----------------
DNA (945bp)
protein (315aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030D5900 rbh
Metal ABC transporter substrate-binding lipoprotein {ECO:0000313|EMBL:KJL30202.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
metal ABC transporter periplasmic protein; K02077 zinc/manganese transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_207_21
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18687..20378)
-----------------
DNA (1692bp)
protein (564aa)
Oligo-1,6-glucosidase {ECO:0000313|EMBL:KJL33915.1}; EC=3.2.1.10 {ECO:0000313|EMBL:KJL33915.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
glycosidase; K01187 alpha-glucosidase [EC:3.2.1.20] rbh
Glycosidase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K0G4_9MICO rbh
scnpilot_solids2_trim150_scaffold_207_22
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20412..21284)
-----------------
DNA (873bp)
protein (291aa)
ABC transporter permease n=1 Tax=Microbacterium barkeri RepID=UPI0002D5583B rbh
Trehalose transport system permease protein SugB {ECO:0000313|EMBL:KJL25626.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
msmG; multiple sugar-binding transport system permease protein MsmG rbh
scnpilot_solids2_trim150_scaffold_207_23
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21284..22195)
-----------------
DNA (912bp)
protein (304aa)
Sugar ABC transporter permease n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCW2_9MICO rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:EQM72696.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
sugar ABC transporter permease; K10118 multiple sugar transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_207_24
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22192..23505)
-----------------
DNA (1314bp)
protein (438aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00037D5599 rbh
Carbohydrate-binding protein {ECO:0000313|EMBL:EYT60529.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
sugar ABC transporter periplasmic protein; K10117 multiple sugar transport system substrate-binding protein rbh
scnpilot_solids2_trim150_scaffold_207_25
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23619..24833
-----------------
DNA (1215bp)
protein (405aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KA31_9MICO rbh
N-acetylglucosamine repressor {ECO:0000313|EMBL:KJL33911.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transcriptional regulator/sugar kinase rbh
scnpilot_solids2_trim150_scaffold_207_26
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24859..25698)
-----------------
DNA (840bp)
protein (280aa)
IclR family transcriptional regulator n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P8F5_LEIXC rbh
IclR family transcriptional regulator rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW42096.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
scnpilot_solids2_trim150_scaffold_207_27
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25828..26496
-----------------
DNA (669bp)
protein (223aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00035C9041
Glycine betaine/carnitine/choline transport system permease protein OpuCB {ECO:0000313|EMBL:KJL24747.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
glycine betaine/carnitine/choline ABC transporter; K05846 osmoprotectant transport system permease protein
scnpilot_solids2_trim150_scaffold_207_28
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26496..27548
-----------------
DNA (1053bp)
protein (351aa)
Carnitine transport ATP-binding protein OpuCA {ECO:0000313|EMBL:KJL24746.1}; EC=3.6.3.32 {ECO:0000313|EMBL:KJL24746.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DE5E3A rbh
glycine betaine/L-proline transport ATP binding subunit rbh
scnpilot_solids2_trim150_scaffold_207_29
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27545..28321
-----------------
DNA (777bp)
protein (259aa)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI00035ED165 rbh
Glycine betaine/carnitine/choline transport system permease protein OpuCB {ECO:0000313|EMBL:KJL24745.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
opuCB; glycine betaine/carnitine/choline transport system permease; K05846 osmoprotectant transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_207_30
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28385..29329
-----------------
DNA (945bp)
protein (315aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C58B5 rbh
Glycine/betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYT61320.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
osmF; osmoprotectant uptake system substrate-binding protein OsmF rbh
Displaying items 1-30 of 239 in total

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