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scnpilot_solids2_trim150_scaffold_86_62

Organism: SCNPILOT_SOLID2_TRIM150_Microbacterium_69_27

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 48585..49469

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000318F025 similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 294.0
  • Bit_score: 408
  • Evalue 7.80e-111
  • rbh
Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:KJL20687.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 294.0
  • Bit_score: 406
  • Evalue 3.20e-110
LysR family transcriptional regulator; K05596 LysR family transcriptional regulator, chromosome initiation inhibitor similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 299.0
  • Bit_score: 373
  • Evalue 5.10e-101
  • rbh

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Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 885
GTGAGGATCGATGCACAGCTGGCCGCCACTGTCGCCGCCGCCGTGGACGAGGGCAGCTTCGACGCAGCCGCACGGCGCCTGCACATCACGCCGTCGGCGGTGAGCCAGCGCATCAAGGCCGTCGAGCAGCAGCTCGGACGCGTGGTGGTCGTGCGCTCCCGTCCGGTGCGCGCCACCGAAGCCGGTGAGGCGCTGATCAGGCTGGCGCGACAGGTGCAGCTGCTCGAGCACGACGCCGTCGGCGCGTTCGGGTTGGGCGACGTCGACGGCGCGGCGCCGAGGATCCGCGTGCCGCTGGCCGTGAACGCCGACTCGATGGCCACCTGGTTCCTGGCTCCCATCGCGCGCGTCGCGCAGCAGCATCCGATCGATGTCGACCTGCACCGCGACGATCAGGACTACACCGCTCGGCTGCTGGAATCGGGGGAGGTGATGGCAGCCGTCACCAGCGAGTCCGCGCCGGTCGGCGGCAGTGCGGTCACGCCGCTGGGCGTGCTGGAGTACCGCGCCATGGCGACGGCCGACTATATCGCGCGCTGGTTCCCGCACGGCGTGACGGCAGACGCGCTGCAGATCGCGCCGTTCGTGGATTTCGATCGGCGCGACGACCTGCAGCAGGACTGGCTGCGGGCCAGGGGAGTGGACCCGTGGTCGGTGCCGAGGCACTACGTGCCGGCATCCCACGACTTCTCGCAGGCGGTGCGGCTCGGGCTCGGCTGGGGGCTGATCCCCGCGCCGCAGGCGAGCGACGATCTCATCGAGCTGGGCGGCCCGCCGACGCGCGTGCCGCTGTACTGGCAGCAGTGGAATCTGCGTTCGCCCCTGCTGGATGCCCTCGCCGCCGAGGTCCTCGCCGAGGCCCGCCACATCCTCGCGCCGCTGTAG
PROTEIN sequence
Length: 295
VRIDAQLAATVAAAVDEGSFDAAARRLHITPSAVSQRIKAVEQQLGRVVVVRSRPVRATEAGEALIRLARQVQLLEHDAVGAFGLGDVDGAAPRIRVPLAVNADSMATWFLAPIARVAQQHPIDVDLHRDDQDYTARLLESGEVMAAVTSESAPVGGSAVTPLGVLEYRAMATADYIARWFPHGVTADALQIAPFVDFDRRDDLQQDWLRARGVDPWSVPRHYVPASHDFSQAVRLGLGWGLIPAPQASDDLIELGGPPTRVPLYWQQWNLRSPLLDALAAEVLAEARHILAPL*