ggKbase home page

scnpilot_solids2_trim150_scaffold_86

Search features with annotation key words

Displaying items 1-30 of 291 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_86_1
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..246
-----------------
DNA (246bp)
protein (82aa)
elongation factor Tu n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B500F5
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
elongation factor Tu
scnpilot_solids2_trim150_scaffold_86_2
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

397..609
-----------------
DNA (213bp)
protein (71aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K241_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL34422.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_86_3
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1288..1596
-----------------
DNA (309bp)
protein (103aa)
30S ribosomal protein S10 n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B547DE
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
30S ribosomal protein S10P; K02946 small subunit ribosomal protein S10
scnpilot_solids2_trim150_scaffold_86_4
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1605..2264
-----------------
DNA (660bp)
protein (220aa)
50S ribosomal protein L3 n=1 Tax=Microbacterium yannicii RepID=UPI0002DA5EFE rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
rplC; ribosomal protein L3; K02906 large subunit ribosomal protein L3 rbh
scnpilot_solids2_trim150_scaffold_86_5
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2267..2929
-----------------
DNA (663bp)
protein (221aa)
50S ribosomal protein L4 n=1 Tax=Microbacterium barkeri RepID=UPI0002FB61FB rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
rplD; ribosomal protein L4; K02926 large subunit ribosomal protein L4 rbh
scnpilot_solids2_trim150_scaffold_86_6
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2926..3246
-----------------
DNA (321bp)
protein (107aa)
50S ribosomal protein L23 n=1 Tax=Microbacterium barkeri RepID=UPI000305CBCB
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
rplW; ribosomal protein L23; K02892 large subunit ribosomal protein L23
scnpilot_solids2_trim150_scaffold_86_7
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


3267..4106
-----------------
DNA (840bp)
protein (280aa)
50S ribosomal protein L2 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBP2_9MICO rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
rplB; ribosomal protein L2; K02886 large subunit ribosomal protein L2 rbh
scnpilot_solids2_trim150_scaffold_86_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4119..4400
-----------------
DNA (282bp)
protein (94aa)
30S ribosomal protein S19 n=1 Tax=Microbacterium RepID=UPI00036A2E7C
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rpsS; ribosomal protein S19; K02965 small subunit ribosomal protein S19
scnpilot_solids2_trim150_scaffold_86_9
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4400..4798
-----------------
DNA (399bp)
protein (133aa)
50S ribosomal protein L22 n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003758AE0
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
rplV; ribosomal protein L22; K02890 large subunit ribosomal protein L22
scnpilot_solids2_trim150_scaffold_86_10
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4798..5544
-----------------
DNA (747bp)
protein (249aa)
30S ribosomal protein S3 n=1 Tax=Microbacterium yannicii RepID=UPI0002FFC1CE rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rpsC; ribosomal protein S3; K02982 small subunit ribosomal protein S3 rbh
scnpilot_solids2_trim150_scaffold_86_11
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5544..5963
-----------------
DNA (420bp)
protein (140aa)
50S ribosomal protein L16 n=1 Tax=Microbacterium RepID=UPI000306BDB4
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
rplP; ribosomal protein L16/L10E; K02878 large subunit ribosomal protein L16
scnpilot_solids2_trim150_scaffold_86_12
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5963..6277
-----------------
DNA (315bp)
protein (105aa)
50S ribosomal protein L29 n=1 Tax=Microbacterium barkeri RepID=UPI0002F719AC
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rpmC; ribosomal protein L29; K02904 large subunit ribosomal protein L29
scnpilot_solids2_trim150_scaffold_86_13
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6277..6591
-----------------
DNA (315bp)
protein (105aa)
30S ribosomal protein S17 n=1 Tax=Microbacterium sp. 292MF RepID=UPI000362ED35
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|SAAS:SAAS00023564}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rpsQ; ribosomal protein S17; K02961 small subunit ribosomal protein S17
scnpilot_solids2_trim150_scaffold_86_14
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6588..6956
-----------------
DNA (369bp)
protein (123aa)
50S ribosomal protein L14 n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003684501
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
rplN; ribosomal protein L14; K02874 large subunit ribosomal protein L14
scnpilot_solids2_trim150_scaffold_86_15
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6959..7318
-----------------
DNA (360bp)
protein (120aa)
50S ribosomal protein L24 n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C954A
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rplX; ribosomal protein L24; K02895 large subunit ribosomal protein L24
scnpilot_solids2_trim150_scaffold_86_16
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7318..7908
-----------------
DNA (591bp)
protein (197aa)
50S ribosomal protein L5 n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000346CD3A rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
rplE; ribosomal protein L5; K02931 large subunit ribosomal protein L5 rbh
scnpilot_solids2_trim150_scaffold_86_17
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8073..8471
-----------------
DNA (399bp)
protein (133aa)
30S ribosomal protein S8 n=1 Tax=Microbacterium barkeri RepID=UPI00030EA9DF
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rpsH; ribosomal protein S8; K02994 small subunit ribosomal protein S8
scnpilot_solids2_trim150_scaffold_86_18
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8520..9014
-----------------
DNA (495bp)
protein (165aa)
50S ribosomal protein L6 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K1U0_9MICO
50S ribosomal protein L6 {ECO:0000256|RuleBase:RU003870}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rplF; ribosomal protein L6P/L9E; K02933 large subunit ribosomal protein L6
scnpilot_solids2_trim150_scaffold_86_19
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


9017..9376
-----------------
DNA (360bp)
protein (120aa)
50S ribosomal protein L18 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KC82_9MICO
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
rplR; ribosomal protein L18; K02881 large subunit ribosomal protein L18
scnpilot_solids2_trim150_scaffold_86_20
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


9373..10053
-----------------
DNA (681bp)
protein (227aa)
30S ribosomal protein S5 n=1 Tax=Microbacterium sp. 11MF RepID=UPI00035FB69E rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
rpsE; ribosomal protein S5; K02988 small subunit ribosomal protein S5 rbh
scnpilot_solids2_trim150_scaffold_86_21
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10053..10238
-----------------
DNA (186bp)
protein (62aa)
50S ribosomal protein L30 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF17_MICTS
rpmD; ribosomal protein L30/L7E; K02907 large subunit ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
scnpilot_solids2_trim150_scaffold_86_22
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10238..10819
-----------------
DNA (582bp)
protein (194aa)
50S ribosomal protein L15 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KG94_9MICO rbh
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
rplO; ribosomal protein L15; K02876 large subunit ribosomal protein L15
scnpilot_solids2_trim150_scaffold_86_23
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


10933..12255
-----------------
DNA (1323bp)
protein (441aa)
preprotein translocase subunit SecY n=1 Tax=Microbacterium barkeri RepID=UPI00030CD317 rbh
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_86_24
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12252..12848
-----------------
DNA (597bp)
protein (199aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microba
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3]
Adenylate kinase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K230_9MICO rbh
scnpilot_solids2_trim150_scaffold_86_25
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12854..13702
-----------------
DNA (849bp)
protein (283aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
map; methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] rbh
Methionine aminopeptidase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCH3_9MICO rbh
scnpilot_solids2_trim150_scaffold_86_26
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13801..14469
-----------------
DNA (669bp)
protein (223aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEF4_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM73276.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
protein-disulfide isomerase
scnpilot_solids2_trim150_scaffold_86_27
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14612..14833
-----------------
DNA (222bp)
protein (74aa)
translation initiation factor IF-1 n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036D973E
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
infA; translation initiation factor 1 (IF-1); K02518 translation initiation factor IF-1
scnpilot_solids2_trim150_scaffold_86_28
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14901..15017
-----------------
DNA (117bp)
protein (39aa)
50S ribosomal protein L36 n=3 Tax=Microbacterium RepID=H8E500_9MICO
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
rpmJ; 50S ribosomal protein L36
scnpilot_solids2_trim150_scaffold_86_29
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


15179..15553
-----------------
DNA (375bp)
protein (125aa)
30S ribosomal protein S13 n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DFDD5
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
rpsM; ribosomal protein S13; K02952 small subunit ribosomal protein S13
scnpilot_solids2_trim150_scaffold_86_30
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


15675..15917
-----------------
DNA (243bp)
protein (81aa)
30S ribosomal protein S11 n=2 Tax=Microbacterium RepID=H8E4Z8_9MICO
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rpsK; ribosomal protein S11; K02948 small subunit ribosomal protein S11
Displaying items 1-30 of 291 in total

View Taxonomy