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scnpilot_solids2_trim150_scaffold_86

Search features with annotation key words

Displaying items 121-150 of 291 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_86_118
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

112643..112852
-----------------
DNA (210bp)
protein (70aa)
hypothetical protein n=1 Tax=Microbacterium RepID=UPI00036FDF77
Uncharacterized protein {ECO:0000313|EMBL:GAD35397.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_86_119
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

112849..113280
-----------------
DNA (432bp)
protein (144aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000372D5C2
Uncharacterized protein {ECO:0000313|EMBL:KJQ55353.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_86_120
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

113310..113636
-----------------
DNA (327bp)
protein (109aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003469E1B
Uncharacterized protein {ECO:0000313|EMBL:KJL25939.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
scnpilot_solids2_trim150_scaffold_86_121
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

113710..116583
-----------------
DNA (2874bp)
protein (958aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
topA; topoisomerase IA; K03168 DNA topoisomerase I [EC:5.99.1.2] rbh
DNA topoisomerase 1 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KRL7_9MICO rbh
scnpilot_solids2_trim150_scaffold_86_122
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

116580..117209
-----------------
DNA (630bp)
protein (210aa)
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D46072 rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_86_123
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

117254..118411
-----------------
DNA (1158bp)
protein (386aa)
ATPase; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] rbh
DNA polymerase III subunit delta'''' n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003493995 rbh
Contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92189.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids2_trim150_scaffold_86_124
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

118408..119958
-----------------
DNA (1551bp)
protein (517aa)
Carboxylesterase A {ECO:0000313|EMBL:KJQ55348.1}; EC=3.1.1.- {ECO:0000313|EMBL:KJQ55348.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030C57E2 rbh
hydrolase or acyltransferase rbh
scnpilot_solids2_trim150_scaffold_86_trna_2
unknown

Not on your lists

120030..120101
-----------------
DNA (72bp)
transferRNA Thr
scnpilot_solids2_trim150_scaffold_86_125
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(120159..120296)
-----------------
DNA (138bp)
protein (46aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KGH4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM74564.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
scnpilot_solids2_trim150_scaffold_86_126
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(120316..122025)
-----------------
DNA (1710bp)
protein (570aa)
sodium:proline symporter n=1 Tax=Leucobacter salsicius RepID=UPI00034CF51A rbh
Sodium:proline symporter {ECO:0000313|EMBL:KDA06250.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
Na+/solute symporter rbh
scnpilot_solids2_trim150_scaffold_86_127
unknown

Not on your lists

comp(122084..122176)
-----------------
DNA (93bp)
protein (31aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_86_128
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

122476..123057
-----------------
DNA (582bp)
protein (194aa)
amidase; K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KPD6_9MICO rbh
Nicotinamidase/pyrazinamidase {ECO:0000313|EMBL:KJQ55347.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
scnpilot_solids2_trim150_scaffold_86_129
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

123054..123593
-----------------
DNA (540bp)
protein (180aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F10188
Uncharacterized protein {ECO:0000313|EMBL:KJL31272.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
purH; hypothetical protein
scnpilot_solids2_trim150_scaffold_86_130
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

123617..124270
-----------------
DNA (654bp)
protein (218aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031620E0
Contig_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIP90963.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_86_131
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124288..125067
-----------------
DNA (780bp)
protein (260aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000379FD32 rbh
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EWY39546.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
scnpilot_solids2_trim150_scaffold_86_132
Brevibacterium casei, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

125177..125428
-----------------
DNA (252bp)
protein (84aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI00035EB347
Uncharacterized protein {ECO:0000313|EMBL:EKU45196.1}; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_86_133
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(125463..126290)
-----------------
DNA (828bp)
protein (276aa)
Beta-lactamase class C n=3 Tax=Amycolatopsis mediterranei RepID=D8HY76_AMYMU rbh
beta-lactamase class C rbh
Beta-lactamase class C {ECO:0000313|EMBL:AEK41257.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
scnpilot_solids2_trim150_scaffold_86_134
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

126378..126893
-----------------
DNA (516bp)
protein (172aa)
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1LB28_9MICO
Uncharacterized protein {ECO:0000313|EMBL:ERG64273.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
scnpilot_solids2_trim150_scaffold_86_trna_3
unknown

Not on your lists

126925..126996
-----------------
DNA (72bp)
transferRNA Lys
scnpilot_solids2_trim150_scaffold_86_135
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

127211..127750
-----------------
DNA (540bp)
protein (180aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003043057
DNA-directed RNA polymerase, beta subunit/140 kD subunit
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_86_136
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

127921..128802
-----------------
DNA (882bp)
protein (294aa)
branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; K02619 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] rbh
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEG5_9MICO rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_86_137
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

128873..129676
-----------------
DNA (804bp)
protein (268aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002E2D019
Uncharacterized protein {ECO:0000313|EMBL:KJL31290.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
scnpilot_solids2_trim150_scaffold_86_138
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(129878..130750)
-----------------
DNA (873bp)
protein (291aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00037B3B23
Uncharacterized protein {ECO:0000313|EMBL:KDA05915.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_86_139
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(131039..131818)
-----------------
DNA (780bp)
protein (260aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
phosphate ABC transporter ATPase; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] rbh
Phosphate ABC transporter ATP-binding protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YQN0_9MICO rbh
scnpilot_solids2_trim150_scaffold_86_140
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(131839..132933)
-----------------
DNA (1095bp)
protein (365aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E9EBBB rbh
ABC transporter, permease protein {ECO:0000313|EMBL:CDK01683.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ABC transporter permease rbh
scnpilot_solids2_trim150_scaffold_86_141
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(132935..133870)
-----------------
DNA (936bp)
protein (312aa)
phosphate ABC transporter permease n=1 Tax=Microbacterium yannicii RepID=UPI00037AB79E rbh
Phosphate transport system permease protein PstC 2 {ECO:0000313|EMBL:CDK01684.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
pstC; phosphate ABC transporter, permease component rbh
scnpilot_solids2_trim150_scaffold_86_142
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(133974..135083)
-----------------
DNA (1110bp)
protein (370aa)
Phosphate-binding protein PstS n=1 Tax=Microbacterium sp. TS-1 RepID=U2XBX4_9MICO rbh
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
extra-cellular phosphate-binding protein rbh
scnpilot_solids2_trim150_scaffold_86_143
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(135213..136151)
-----------------
DNA (939bp)
protein (313aa)
Diadenosine hexaphosphate hydrolase {ECO:0000313|EMBL:KJL23336.1}; EC=3.6.1.61 {ECO:0000313|EMBL:KJL23336.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FB4E95 rbh
NTP pyrophosphohydrolase including oxidative damage repair enzyme rbh
scnpilot_solids2_trim150_scaffold_86_144
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(136148..138319)
-----------------
DNA (2172bp)
protein (724aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
ppk; polyphosphate kinase; K00937 polyphosphate kinase [EC:2.7.4.1] rbh
Polyphosphate kinase n=3 Tax=Microbacterium RepID=T5KRK1_9MICO rbh
scnpilot_solids2_trim150_scaffold_86_145
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(138351..139028)
-----------------
DNA (678bp)
protein (226aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KTH3_9MICO rbh
Transcriptional regulator {ECO:0000313|EMBL:KDA05920.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
glnR; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Displaying items 121-150 of 291 in total

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