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scnpilot_solids2_trim150_scaffold_86

Search features with annotation key words

Displaying items 151-180 of 291 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_86_146
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

139100..139393
-----------------
DNA (294bp)
protein (98aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F4B8A2
Uncharacterized protein {ECO:0000313|EMBL:KJL28688.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_86_147
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

139469..139582
-----------------
DNA (114bp)
protein (38aa)
Membrane protein {ECO:0000313|EMBL:KDA05922.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids2_trim150_scaffold_86_148
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

139596..140204
-----------------
DNA (609bp)
protein (203aa)
UPF0678 fatty acid-binding protein-like protein L687_14095 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KPB6_9MICO rbh
UPF0678 fatty acid-binding protein-like protein RS83_02167 {ECO:0000256|HAMAP-Rule:MF_01297}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_86_149
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

140206..141300
-----------------
DNA (1095bp)
protein (365aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KRJ6_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KDA05924.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
aminomethyltransferase; K06980 rbh
scnpilot_solids2_trim150_scaffold_86_150
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(141454..142275)
-----------------
DNA (822bp)
protein (274aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B282C rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL28692.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_86_151
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

142434..143177
-----------------
DNA (744bp)
protein (248aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbact
gpmA; phosphoglycerate mutase 1; K01834 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.1] rbh
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KNK9_9MICO rbh
scnpilot_solids2_trim150_scaffold_86_152
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(143266..143985)
-----------------
DNA (720bp)
protein (240aa)
PhoU family transcriptional regulator n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000346FAE5 rbh
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
phoU; phosphate uptake regulator; K02039 phosphate transport system protein rbh
scnpilot_solids2_trim150_scaffold_86_153
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

144171..145412
-----------------
DNA (1242bp)
protein (414aa)
Signal-transduction histidine kinase senX3 {ECO:0000313|EMBL:KJL23352.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJL23352.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
signal transduction histidine kinase; K07768 two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000374B930 rbh
scnpilot_solids2_trim150_scaffold_86_154
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

145409..146092
-----------------
DNA (684bp)
protein (228aa)
XRE family transcriptional regulator n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KRJ1_9MICO rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:EQM81611.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; K07776 two-component system, OmpR family, response regulator RegX3 rbh
scnpilot_solids2_trim150_scaffold_86_155
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(146166..146711)
-----------------
DNA (546bp)
protein (182aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KTG4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM81610.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
DNA modification methylase
scnpilot_solids2_trim150_scaffold_86_156
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

146862..147344
-----------------
DNA (483bp)
protein (161aa)
CarD family transcriptional regulator n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KNK4_9MICO rbh
RNA polymerase-binding transcription factor CarD {ECO:0000313|EMBL:KJL23545.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
CarD family transcriptional regulator; K07736 CarD family transcriptional regulator
scnpilot_solids2_trim150_scaffold_86_157
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

147383..148615
-----------------
DNA (1233bp)
protein (411aa)
ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] rbh
Bifunctional enzyme IspD/IspF n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDD1_9MICO rbh
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids2_trim150_scaffold_86_158
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

148664..150058
-----------------
DNA (1395bp)
protein (465aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
cysS; cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] rbh
cysteinyl-tRNA synthetase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A7AA2 rbh
scnpilot_solids2_trim150_scaffold_86_159
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

150051..151055
-----------------
DNA (1005bp)
protein (335aa)
Putative TrmH family tRNA/rRNA methyltransferase {ECO:0000313|EMBL:KJL31321.1}; EC=2.1.1.- {ECO:0000313|EMBL:KJL31321.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rRNA methylase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] rbh
RNA methyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0002F80AA4 rbh
scnpilot_solids2_trim150_scaffold_86_160
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

151115..151753
-----------------
DNA (639bp)
protein (213aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000346F9E2 rbh
Contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92220.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
NADH-flavin reductase; K07118
scnpilot_solids2_trim150_scaffold_86_161
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(151801..153108)
-----------------
DNA (1308bp)
protein (436aa)
lipopolysaccharide kinase n=1 Tax=Microbacterium barkeri RepID=UPI00031B04CD rbh
hypothetical protein rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_86_162
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(153233..154339)
-----------------
DNA (1107bp)
protein (369aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003614AB5 rbh
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYT61500.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
sugar ABC transporter ATPase; K10243 cellobiose transport system ATP-binding protein rbh
scnpilot_solids2_trim150_scaffold_86_163
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

154554..155522
-----------------
DNA (969bp)
protein (323aa)
Serine/threonine-protein kinase PknE {ECO:0000313|EMBL:KJL28705.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KJL28705.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00036FA9FD rbh
protein-disulfide isomerase rbh
scnpilot_solids2_trim150_scaffold_86_trna_4
unknown

Not on your lists

155568..155640
-----------------
DNA (73bp)
transferRNA Thr
scnpilot_solids2_trim150_scaffold_86_164
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

155768..156241
-----------------
DNA (474bp)
protein (158aa)
Uncharacterized protein {ECO:0000313|EMBL:KJC65794.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
scnpilot_solids2_trim150_scaffold_86_165
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(156278..156931)
-----------------
DNA (654bp)
protein (218aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KRZ3_9MICO rbh
Contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92230.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids2_trim150_scaffold_86_166
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(156978..157529)
-----------------
DNA (552bp)
protein (184aa)
Putative NAD(P)H nitroreductase YdjA {ECO:0000313|EMBL:KJL31328.1}; EC=1.-.-.- {ECO:0000313|EMBL:KJL31328.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KP11_9MICO
nitroreductase
scnpilot_solids2_trim150_scaffold_86_167
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(157526..157930)
-----------------
DNA (405bp)
protein (135aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000313|EMBL:KJQ55306.1}; EC=1.8.4.12 {ECO:0000313|EMBL:KJQ55306.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
peptide methionine sulfoxide reductase; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
methionine sulfoxide reductase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D5EDC
scnpilot_solids2_trim150_scaffold_86_168
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

157982..158965
-----------------
DNA (984bp)
protein (328aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003478243 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL21010.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_86_169
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

158975..159232
-----------------
DNA (258bp)
protein (86aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C29FA
Contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92235.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_86_170
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

159335..159871
-----------------
DNA (537bp)
protein (179aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KRY8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM81776.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_86_171
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

160000..160944
-----------------
DNA (945bp)
protein (315aa)
60 kDa chaperonin n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KTW5_9MICO
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
groEL; chaperonin GroEL; K04077 chaperonin GroEL
scnpilot_solids2_trim150_scaffold_86_172
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

161057..161554
-----------------
DNA (498bp)
protein (166aa)
molecular chaperone GroEL n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035E05CF
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
groEL; chaperonin GroEL; K04077 chaperonin GroEL
scnpilot_solids2_trim150_scaffold_86_173
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(161775..162062)
-----------------
DNA (288bp)
protein (96aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KP06_9MICO
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_86_174
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(162181..163905)
-----------------
DNA (1725bp)
protein (575aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
signal transduction histidine kinase; K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003461501 rbh
Displaying items 151-180 of 291 in total

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