name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids2_trim150_scaffold_86_263
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(257205..258326)
----------------- DNA (1122bp) protein (374aa) |
ABC-type xylose transport system, periplasmic component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA41_MICTS
rbh
ABC xylose transport system, periplasmic component; K10546 putative multiple sugar transport system substrate-binding protein
rbh
ABC-type xylose transport system, periplasmic component {ECO:0000313|EMBL:BAJ75871.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
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scnpilot_solids2_trim150_scaffold_86_264
unknown
|
Not on your lists |
comp(258323..258787)
----------------- DNA (465bp) protein (155aa) |
L-ribulose-5-phosphate 4-epimerase id=7720901 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
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scnpilot_solids2_trim150_scaffold_86_265
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(258934..259983)
----------------- DNA (1050bp) protein (350aa) |
LacI family transcriptional regulator id=7719971 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:AJW79742.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
transcriptional regulator, LacI family
rbh
|
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scnpilot_solids2_trim150_scaffold_86_266
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
260059..261897
----------------- DNA (1839bp) protein (613aa) |
ABC transporter ATPase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C4CCF
rbh
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJL20760.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ATPase components of ABC transporters with duplicated ATPase domains
rbh
|
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scnpilot_solids2_trim150_scaffold_86_267
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
262159..262995
----------------- DNA (837bp) protein (279aa) |
Extracellular solute-binding protein family 3 n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F6T7_VERMA
rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJK10474.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
family 3 extracellular solute-binding protein
rbh
|
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scnpilot_solids2_trim150_scaffold_86_268
Bifidobacterium subtile, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
263024..263806
----------------- DNA (783bp) protein (261aa) |
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000364BD51
rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:KFJ04573.1}; TaxID=77635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium subtile.;"
polar amino acid ABC transporter inner membrane subunit
rbh
|
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scnpilot_solids2_trim150_scaffold_86_269
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
263803..264570
----------------- DNA (768bp) protein (256aa) |
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000382D42C
rbh
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJK10520.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
ABC transporter ATP-binding protein
rbh
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scnpilot_solids2_trim150_scaffold_86_270
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(264578..265519)
----------------- DNA (942bp) protein (314aa) |
Ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:KJL20769.1}; EC=5.4.99.28 {ECO:0000313|EMBL:KJL20769.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003752CD0
rbh
pseudouridine synthase
rbh
|
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scnpilot_solids2_trim150_scaffold_86_271
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(265533..266018)
----------------- DNA (486bp) protein (162aa) |
MarR family transcriptional regulator n=1 Tax=Microbacterium barkeri RepID=UPI0002FAFD7F
HTH-type transcriptional repressor NicR {ECO:0000313|EMBL:KJL28895.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
marR; transcriptional regulator
|
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scnpilot_solids2_trim150_scaffold_86_trna_7
unknown
|
Not on your lists |
266110..266181
----------------- DNA (72bp) |
transferRNA Gln
|
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scnpilot_solids2_trim150_scaffold_86_272
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria
|
Not on your lists |
266183..267613
----------------- DNA (1431bp) protein (477aa) |
glmU; N-acetylglucosamine-1-phosphate uridyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034700F6
rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
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scnpilot_solids2_trim150_scaffold_86_273
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
267623..268657
----------------- DNA (1035bp) protein (345aa) |
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadir
psrA; phosphoribosylpyrophosphate synthetase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
rbh
Ribose-phosphate pyrophosphokinase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KTC2_9MICO
rbh
|
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scnpilot_solids2_trim150_scaffold_86_274
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
268678..270228
----------------- DNA (1551bp) protein (517aa) |
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034BD069
rbh
Flavodoxin reductase {ECO:0000313|EMBL:EYT58411.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
flavodoxin reductase (ferredoxin-NADPH reductase) family 1
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_275
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria
|
Not on your lists |
comp(270222..271745)
----------------- DNA (1524bp) protein (508aa) |
signal transduction histidine kinase; K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KR39_9MICO
rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
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scnpilot_solids2_trim150_scaffold_86_276
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria
|
Not on your lists |
comp(271752..272480)
----------------- DNA (729bp) protein (243aa) |
Transcriptional regulator n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KTB7_9MICO
rbh
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; K02483 two-component system, OmpR family, response regulator
rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
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scnpilot_solids2_trim150_scaffold_86_277
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(272559..273356)
----------------- DNA (798bp) protein (266aa) |
Putative GntR-family transcriptional regulator n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W409_9MICO
Putative GntR-family transcriptional regulator {ECO:0000313|EMBL:EPR77481.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
GntR family transcriptional regulator
|
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scnpilot_solids2_trim150_scaffold_86_278
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
273479..274789
----------------- DNA (1311bp) protein (437aa) |
hypothetical protein n=1 Tax=Arthrobacter sp. TB 23 RepID=UPI000364B495
rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC68791.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
carbohydrate-binding protein; K02027 multiple sugar transport system substrate-binding protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_279
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
274852..275778
----------------- DNA (927bp) protein (309aa) |
ABC transporter permease n=1 Tax=Glaciibacter superstes RepID=UPI0003B447A3
rbh
ABC-type sugar transport system {ECO:0000313|EMBL:EPR77478.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
carbohydrate ABC transporter membrane protein; K02025 multiple sugar transport system permease protein
rbh
|
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scnpilot_solids2_trim150_scaffold_86_280
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
275775..276656
----------------- DNA (882bp) protein (294aa) |
sugar ABC transporter permease n=1 Tax=Glaciibacter superstes RepID=UPI0003B41FDC
Sugar ABC transporter permease {ECO:0000313|EMBL:KGJ80386.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
carbohydrate ABC transporter membrane protein; K02026 multiple sugar transport system permease protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_281
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
276653..277822
----------------- DNA (1170bp) protein (390aa) |
Gluconate dehydratase {ECO:0000313|EMBL:EPR77475.1}; EC=4.2.1.39 {ECO:0000313|EMBL:EPR77475.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
Gluconate dehydratase n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W3Z5_9MICO
rbh
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scnpilot_solids2_trim150_scaffold_86_282
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(277920..278108)
----------------- DNA (189bp) protein (63aa) |
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
gnd; 6-phosphogluconate dehydrogenase; K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44]
6-phosphogluconate dehydrogenase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000345BCA6
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