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scnpilot_solids2_trim150_scaffold_86

Search features with annotation key words

Displaying items 181-210 of 291 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_86_175
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(163920..164528)
-----------------
DNA (609bp)
protein (203aa)
alkaline phosphatase n=1 Tax=Microbacterium barkeri RepID=UPI0003103BDC rbh
Transcriptional regulator {ECO:0000313|EMBL:KDA05945.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
phoP; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; K02483 two-component system, OmpR family, response regulator rbh
scnpilot_solids2_trim150_scaffold_86_176
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(164650..165147)
-----------------
DNA (498bp)
protein (166aa)
TetR family transcriptional regulator n=1 Tax=Brachybacterium paraconglomeratum RepID=UPI00026C73D8
Uncharacterized protein {ECO:0000313|EMBL:KJL23521.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
regulatory protein TetR
scnpilot_solids2_trim150_scaffold_86_177
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

165250..166158
-----------------
DNA (909bp)
protein (303aa)
Soluble epoxide hydrolase {ECO:0000313|EMBL:KJL23520.1}; EC=3.3.2.10 {ECO:0000313|EMBL:KJL23520.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
alpha/beta hydrolase n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B697F3 rbh
putative hydrolase or acyltransferase of alpha/beta superfamily
scnpilot_solids2_trim150_scaffold_86_178
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

166331..167293
-----------------
DNA (963bp)
protein (321aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CF63E rbh
Abortive infection protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_86_179
unknown

Not on your lists

167304..167447
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_86_180
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(167449..169089)
-----------------
DNA (1641bp)
protein (547aa)
xpbC; DNA or RNA helicase of superfamily II; K10843 DNA excision repair protein ERCC-3 [EC:3.6.4.12] rbh
helicase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C1BED rbh
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:KJL21017.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
scnpilot_solids2_trim150_scaffold_86_181
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(169120..170811)
-----------------
DNA (1692bp)
protein (564aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A17B7 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL23386.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_86_182
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(170824..171099)
-----------------
DNA (276bp)
protein (92aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349D82C
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:KDA05947.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids2_trim150_scaffold_86_183
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

171216..171584
-----------------
DNA (369bp)
protein (123aa)
cold-shock protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CA252
Contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92243.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
cold shock protein
scnpilot_solids2_trim150_scaffold_86_184
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

171568..172182
-----------------
DNA (615bp)
protein (205aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E2F58B
Uncharacterized protein {ECO:0000313|EMBL:KJL23515.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_86_185
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(172290..173393)
-----------------
DNA (1104bp)
protein (368aa)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00182444}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00182444};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
serC; phosphoserine aminotransferase; K00831 phosphoserine aminotransferase [EC:2.6.1.52] rbh
phosphoserine aminotransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A04DE rbh
scnpilot_solids2_trim150_scaffold_86_186
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

173495..174196
-----------------
DNA (702bp)
protein (234aa)
DtxR family transcriptional regulator n=1 Tax=Microbacterium barkeri RepID=UPI000302FC99 rbh
Iron-dependent repressor IdeR {ECO:0000313|EMBL:KJL21023.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
Mn-dependent transcriptional regulator; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator rbh
scnpilot_solids2_trim150_scaffold_86_187
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

174368..175270
-----------------
DNA (903bp)
protein (301aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030B62D9 rbh
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_86_188
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

175575..176072
-----------------
DNA (498bp)
protein (166aa)
HNH endonuclease n=1 Tax=Microbacterium barkeri RepID=UPI0003112078 rbh
CRISPR-associated endonuclease Cas9 {ECO:0000313|EMBL:KJQ55288.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
restriction endonuclease
scnpilot_solids2_trim150_scaffold_86_trna_5
unknown

Not on your lists

176104..176177
-----------------
DNA (74bp)
transferRNA Arg
scnpilot_solids2_trim150_scaffold_86_189
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(176818..177663)
-----------------
DNA (846bp)
protein (282aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F5FD69 rbh
Bacterial regulatory protein, luxR family {ECO:0000313|EMBL:KJQ55276.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
DNA-binding HTH domain-containing proteins rbh
scnpilot_solids2_trim150_scaffold_86_190
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

177779..178126
-----------------
DNA (348bp)
protein (116aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E4BF6C
Inner membrane protein YjcH {ECO:0000313|EMBL:KJQ55275.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_86_191
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

178123..179742
-----------------
DNA (1620bp)
protein (540aa)
Symporter n=1 Tax=Brevibacterium casei S18 RepID=K9AS47_9MICO rbh
Acetate permease {ECO:0000313|EMBL:KDA05964.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
symporter; K14393 cation/acetate symporter rbh
scnpilot_solids2_trim150_scaffold_86_192
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(179945..180472)
-----------------
DNA (528bp)
protein (176aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:KJQ55273.1}; EC=2.1.1.63 {ECO:0000313|EMBL:KJQ55273.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
methylated DNA-protein cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F1F444
scnpilot_solids2_trim150_scaffold_86_193
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

180701..184357
-----------------
DNA (3657bp)
protein (1219aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003823CBB rbh
ATPase AAA {ECO:0000313|EMBL:EYT61455.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
superfamily I DNA and RNA helicase and helicase subunits rbh
scnpilot_solids2_trim150_scaffold_86_194
unknown

Not on your lists

184350..184526
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_86_195
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(184615..184995)
-----------------
DNA (381bp)
protein (127aa)
Large conductance mechanosensitive channel protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E760_9MICO
Large-conductance mechanosensitive channel {ECO:0000256|SAAS:SAAS00023935}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel
scnpilot_solids2_trim150_scaffold_86_196
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(185026..185298)
-----------------
DNA (273bp)
protein (91aa)
FmdB family transcriptional regulator n=1 Tax=Microbacterium barkeri RepID=UPI0003193229
Uncharacterized protein {ECO:0000313|EMBL:KDA05966.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_86_197
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(185312..185893)
-----------------
DNA (582bp)
protein (194aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Microbacterium barkeri RepID=UPI000314921C rbh
scnpilot_solids2_trim150_scaffold_86_198
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

185991..186872
-----------------
DNA (882bp)
protein (294aa)
galU; UDP-glucose pyrophosphorylase; K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] rbh
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0002D2A1E7 rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_86_199
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

186886..187509
-----------------
DNA (624bp)
protein (208aa)
Putative ribosomal N-acetyltransferase YdaF {ECO:0000313|EMBL:KJL26923.1}; EC=2.3.1.- {ECO:0000313|EMBL:KJL26923.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
acetyltransferase, including N-acetylase of ribosomal proteins; K03790 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] rbh
N-acetyltransferase GCN5 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KGK3_9MICO rbh
scnpilot_solids2_trim150_scaffold_86_200
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

187578..188447
-----------------
DNA (870bp)
protein (290aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000368E8B2 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJQ55266.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical membrane protein
scnpilot_solids2_trim150_scaffold_86_trna_6
unknown

Not on your lists

188475..188547
-----------------
DNA (73bp)
transferRNA Ala
scnpilot_solids2_trim150_scaffold_86_201
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

188670..188804
-----------------
DNA (135bp)
protein (45aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL23064.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
scnpilot_solids2_trim150_scaffold_86_202
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(188871..189599)
-----------------
DNA (729bp)
protein (243aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DD4D8 rbh
Acetate operon repressor {ECO:0000313|EMBL:KJL31417.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transcriptional regulator rbh
Displaying items 181-210 of 291 in total

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