name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids2_trim150_scaffold_86_175
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(163920..164528)
----------------- DNA (609bp) protein (203aa) |
alkaline phosphatase n=1 Tax=Microbacterium barkeri RepID=UPI0003103BDC
rbh
Transcriptional regulator {ECO:0000313|EMBL:KDA05945.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
phoP; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; K02483 two-component system, OmpR family, response regulator
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_176
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(164650..165147)
----------------- DNA (498bp) protein (166aa) |
TetR family transcriptional regulator n=1 Tax=Brachybacterium paraconglomeratum RepID=UPI00026C73D8
Uncharacterized protein {ECO:0000313|EMBL:KJL23521.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
regulatory protein TetR
|
|
scnpilot_solids2_trim150_scaffold_86_177
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
165250..166158
----------------- DNA (909bp) protein (303aa) |
Soluble epoxide hydrolase {ECO:0000313|EMBL:KJL23520.1}; EC=3.3.2.10 {ECO:0000313|EMBL:KJL23520.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
alpha/beta hydrolase n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B697F3
rbh
putative hydrolase or acyltransferase of alpha/beta superfamily
|
|
scnpilot_solids2_trim150_scaffold_86_178
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria
|
Not on your lists |
166331..167293
----------------- DNA (963bp) protein (321aa) |
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CF63E
rbh
Abortive infection protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
|
|
scnpilot_solids2_trim150_scaffold_86_179
unknown
|
Not on your lists |
167304..167447
----------------- DNA (144bp) protein (48aa) |
This feature has no annotations |
|
scnpilot_solids2_trim150_scaffold_86_180
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(167449..169089)
----------------- DNA (1641bp) protein (547aa) |
xpbC; DNA or RNA helicase of superfamily II; K10843 DNA excision repair protein ERCC-3 [EC:3.6.4.12]
rbh
helicase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C1BED
rbh
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:KJL21017.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
|
|
scnpilot_solids2_trim150_scaffold_86_181
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(169120..170811)
----------------- DNA (1692bp) protein (564aa) |
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A17B7
rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL23386.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_182
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(170824..171099)
----------------- DNA (276bp) protein (92aa) |
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349D82C
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:KDA05947.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
|
|
scnpilot_solids2_trim150_scaffold_86_183
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
171216..171584
----------------- DNA (369bp) protein (123aa) |
cold-shock protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CA252
Contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92243.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
cold shock protein
|
|
scnpilot_solids2_trim150_scaffold_86_184
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
171568..172182
----------------- DNA (615bp) protein (205aa) |
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E2F58B
Uncharacterized protein {ECO:0000313|EMBL:KJL23515.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_86_185
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(172290..173393)
----------------- DNA (1104bp) protein (368aa) |
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00182444}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00182444};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
phosphoserine aminotransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A04DE
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_186
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
173495..174196
----------------- DNA (702bp) protein (234aa) |
DtxR family transcriptional regulator n=1 Tax=Microbacterium barkeri RepID=UPI000302FC99
rbh
Iron-dependent repressor IdeR {ECO:0000313|EMBL:KJL21023.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
Mn-dependent transcriptional regulator; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_187
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria
|
Not on your lists |
174368..175270
----------------- DNA (903bp) protein (301aa) |
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030B62D9
rbh
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
|
|
scnpilot_solids2_trim150_scaffold_86_188
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
175575..176072
----------------- DNA (498bp) protein (166aa) |
HNH endonuclease n=1 Tax=Microbacterium barkeri RepID=UPI0003112078
rbh
CRISPR-associated endonuclease Cas9 {ECO:0000313|EMBL:KJQ55288.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
restriction endonuclease
|
|
scnpilot_solids2_trim150_scaffold_86_trna_5
unknown
|
Not on your lists |
176104..176177
----------------- DNA (74bp) |
transferRNA Arg
|
|
scnpilot_solids2_trim150_scaffold_86_189
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(176818..177663)
----------------- DNA (846bp) protein (282aa) |
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F5FD69
rbh
Bacterial regulatory protein, luxR family {ECO:0000313|EMBL:KJQ55276.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
DNA-binding HTH domain-containing proteins
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_190
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
177779..178126
----------------- DNA (348bp) protein (116aa) |
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E4BF6C
Inner membrane protein YjcH {ECO:0000313|EMBL:KJQ55275.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_86_191
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
178123..179742
----------------- DNA (1620bp) protein (540aa) |
Symporter n=1 Tax=Brevibacterium casei S18 RepID=K9AS47_9MICO
rbh
Acetate permease {ECO:0000313|EMBL:KDA05964.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
symporter; K14393 cation/acetate symporter
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_192
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(179945..180472)
----------------- DNA (528bp) protein (176aa) |
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:KJQ55273.1}; EC=2.1.1.63 {ECO:0000313|EMBL:KJQ55273.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
methylated DNA-protein cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F1F444
|
|
scnpilot_solids2_trim150_scaffold_86_193
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
180701..184357
----------------- DNA (3657bp) protein (1219aa) |
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003823CBB
rbh
ATPase AAA {ECO:0000313|EMBL:EYT61455.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
superfamily I DNA and RNA helicase and helicase subunits
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_194
unknown
|
Not on your lists |
184350..184526
----------------- DNA (177bp) protein (59aa) |
This feature has no annotations |
|
scnpilot_solids2_trim150_scaffold_86_195
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(184615..184995)
----------------- DNA (381bp) protein (127aa) |
Large conductance mechanosensitive channel protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E760_9MICO
Large-conductance mechanosensitive channel {ECO:0000256|SAAS:SAAS00023935}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel
|
|
scnpilot_solids2_trim150_scaffold_86_196
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(185026..185298)
----------------- DNA (273bp) protein (91aa) |
FmdB family transcriptional regulator n=1 Tax=Microbacterium barkeri RepID=UPI0003193229
Uncharacterized protein {ECO:0000313|EMBL:KDA05966.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_86_197
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(185312..185893)
----------------- DNA (582bp) protein (194aa) |
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Microbacterium barkeri RepID=UPI000314921C
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_198
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria
|
Not on your lists |
185991..186872
----------------- DNA (882bp) protein (294aa) |
galU; UDP-glucose pyrophosphorylase; K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
rbh
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0002D2A1E7
rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
|
|
scnpilot_solids2_trim150_scaffold_86_199
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
186886..187509
----------------- DNA (624bp) protein (208aa) |
Putative ribosomal N-acetyltransferase YdaF {ECO:0000313|EMBL:KJL26923.1}; EC=2.3.1.- {ECO:0000313|EMBL:KJL26923.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
acetyltransferase, including N-acetylase of ribosomal proteins; K03790 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]
rbh
N-acetyltransferase GCN5 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KGK3_9MICO
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_200
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
187578..188447
----------------- DNA (870bp) protein (290aa) |
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000368E8B2
rbh
Uncharacterized protein {ECO:0000313|EMBL:KJQ55266.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical membrane protein
|
|
scnpilot_solids2_trim150_scaffold_86_trna_6
unknown
|
Not on your lists |
188475..188547
----------------- DNA (73bp) |
transferRNA Ala
|
|
scnpilot_solids2_trim150_scaffold_86_201
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
188670..188804
----------------- DNA (135bp) protein (45aa) |
Uncharacterized protein {ECO:0000313|EMBL:KJL23064.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
|
|
scnpilot_solids2_trim150_scaffold_86_202
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(188871..189599)
----------------- DNA (729bp) protein (243aa) |
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DD4D8
rbh
Acetate operon repressor {ECO:0000313|EMBL:KJL31417.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transcriptional regulator
rbh
|