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scnpilot_solids2_trim150_scaffold_86_180

Organism: SCNPILOT_SOLID2_TRIM150_Microbacterium_69_27

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(167449..169089)

Top 3 Functional Annotations

Value Algorithm Source
xpbC; DNA or RNA helicase of superfamily II; K10843 DNA excision repair protein ERCC-3 [EC:3.6.4.12] similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 546.0
  • Bit_score: 930
  • Evalue 2.60e-268
  • rbh
helicase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C1BED similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 546.0
  • Bit_score: 1003
  • Evalue 5.90e-290
  • rbh
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:KJL21017.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 546.0
  • Bit_score: 1007
  • Evalue 5.80e-291

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Taxonomy

Microbacterium foliorum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1641
ATGTCTGATGGCCCACTGATCGTCCAGAGCGACCGCACCGTGCTGCTGGAGGTCGCGCACTCCGACGCGGACGCCGCCCGCCACGAGCTGGCGATCTTCGCCGAGCTGGAGCGCGCCCCCGAGCACATGCACACCTACCGCATCACGCGGCTGGGCCTGTGGAACGCCCGTGCGGCCGGCCACACCGCCGACGACATGCTGGCGACGCTCGAGCGGTGGTCGCGCTTCCCCGTCCCGCCGTCCGTGGCGCTGGACCTGCGCGAGACCGTGGACCGCTACGGACGCCTGATCATCGAGCGCGACGACGAGGGCGCGCTGATCCTGCACTCCACGGATCCCGCCGTGCTCACCCAGGTCGCCGCGAACAGGCGCATCCAGCCGCTGCTGATCGACCACCCCACCCCCGAGACGTACGTCGTGGACGCGTGGGCGCGCGGTCAGATCAAGCAGGAGCTGCTGAAGATCGGCTGGCCGGCCGAGGACCTCGCCGGCTACACGCCGGGCACGCCGCACGAGATCGAGCTGGATGAGGACGGCTGGGCGATGCGGCCGTACCAGCACGAGGCCGTGGACGCCTTCGCGAAGGAGGGCTCCGGCGTGGTGGTGCTGCCCTGCGGCGCAGGGAAGACCATCGTCGGCGCGGGCGCGATGGCCGCGACCGGCACCACCACGCTGATCCTCGTGACCAACACGGTCTCGGCCCGGCAGTGGCGCGACGAGCTGCTCAAGCGCACCTCGCTCACGCCCGAGGAGATCGGCGAGTACTCCGGGCAGGCCAAGGAGATCAAGCCGGTCACCATCGCCACGTACCAGATCCTCACCGCCAAGCGGAAGGGCCAGTACGCGCACCTGGCGCTGCTGGATGCCCTGGACTGGGGCCTGATCGTCTACGACGAGGTGCACCTGCTGCCGGCGCCCGTGTTCAAGCTCACCGCCGACCTGCAGGCCCGCCGCAGGATCGGCCTGACCGCCACGCTCGTGCGCGAGGACGGTCGCGAGGGTGACGTGTTCAGCCTGATCGGGCCGAAGCGGTTCGACGCACCGTGGAAGCAGATCGAGGCGCAGGGCTTCATCTCCCCGGCCGCCTGCTACGAGGTGCGCGTGGACCTGCCGCCCAGCACCCGGCTGGAGTACGCCGCAGCCACCGACGACGAGCGGTACCGGCTCGCAGCATCCGCTCCGGAGAAGATCACCGCGGTGCGCGAGTTGATCGCCAAGCATCCCGGCGAGCGCATCCTCGTGATCGGCCAGTATCTCGACCAGCTCGACGAGCTGTCCGAGGCGCTGAACGCCCCGCAGATCACCGGCGCCACGCCCGTGGACGAGCGCGAGCAGCTGTATCGGCAGTTCCGCGAGGGCGAGATCTCGCTGCTGGTGGTCTCGAAGGTCGCGAACTTCTCGGTGGATCTGCCGGAGGCATCCGTCGCCATCCAGGTGTCGGGATCGTTCGGCTCCCGGCAGGAGGAGGCCCAGCGGCTGGGCCGCCTGCTGCGGCCCAAGCAGTCCGGGCACACCGCCAGCTTCTACACGCTGATCGCCCGGGACACGGTCGATCAGGACTACGCGCAGAACCGGCAGCGGTTCCTCGCCGAGCAGGGCTACAGCTACACCATCATGGATGCTGTGAGCCTGGCCGCCTGA
PROTEIN sequence
Length: 547
MSDGPLIVQSDRTVLLEVAHSDADAARHELAIFAELERAPEHMHTYRITRLGLWNARAAGHTADDMLATLERWSRFPVPPSVALDLRETVDRYGRLIIERDDEGALILHSTDPAVLTQVAANRRIQPLLIDHPTPETYVVDAWARGQIKQELLKIGWPAEDLAGYTPGTPHEIELDEDGWAMRPYQHEAVDAFAKEGSGVVVLPCGAGKTIVGAGAMAATGTTTLILVTNTVSARQWRDELLKRTSLTPEEIGEYSGQAKEIKPVTIATYQILTAKRKGQYAHLALLDALDWGLIVYDEVHLLPAPVFKLTADLQARRRIGLTATLVREDGREGDVFSLIGPKRFDAPWKQIEAQGFISPAACYEVRVDLPPSTRLEYAAATDDERYRLAASAPEKITAVRELIAKHPGERILVIGQYLDQLDELSEALNAPQITGATPVDEREQLYRQFREGEISLLVVSKVANFSVDLPEASVAIQVSGSFGSRQEEAQRLGRLLRPKQSGHTASFYTLIARDTVDQDYAQNRQRFLAEQGYSYTIMDAVSLAA*