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scnpilot_solids2_trim150_scaffold_86_265

Organism: SCNPILOT_SOLID2_TRIM150_Microbacterium_69_27

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(258934..259983)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator id=7719971 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 330.0
  • Bit_score: 450
  • Evalue 2.10e-123
  • rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:AJW79742.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 338.0
  • Bit_score: 412
  • Evalue 5.30e-112
transcriptional regulator, LacI family similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 333.0
  • Bit_score: 410
  • Evalue 4.50e-112
  • rbh

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
GTGACCGTGCGCATCAGGAAGGGGACGATCGTGGATCGCGTTCGCGCTCCCAACATCCGCGATGTCGCGCGCCTGGCCGGCGTCTCGTACCAGACCGTGTCGCGCGTGCTCAACGACTCCCCCAACATCCGCGACGCGACGAAGGATCGCGTGCTGGCCGCGATCGACGAACTGGGGTACCGGCCGAACCAGGCCGCGCGCACGCTGGTGACCAGCCGTTCCCAGACCATCGGCGTGCTCACGTCGATGTCGGTGCACTACGGCCCCACCACCGCCATCAACGCACTCGAGCAGTCCGCCCGCGACGCGGGGTACCGGATGAGCCTGACCACGCTCGCCAGCAGCGACGATGCAGCCATCCGCAGCAGCCTGGACTTCCTGATGTCGCAGGGCATCGAGGGCCTTGTCGTGATCGCACCGCAGGAGCGCATCATCCAGGCCCTCGAGGACGCGGCCATCACGATCCCCACCATCACCCTGGACACCAGCGGACGCGCCAGCGGACACAGCGTCGGCGTGGACCAGATCGCCGGGGCCAGGCTGGCCACGCAGCATCTGATCGACCTGGGTCACACCGACATCGTGCACATCGCCGGTCCCCGTGACTGGATCGAGGCGGATGCCCGGATGCGCGGCTACCTGCAGACGCTGTCGGATGCCGACCTGCGCACCCGCGCGCCCATCCTCGGCGACTGGAGCGCGGGCTTCGGCTACTACGCGGGCAAGGAGCTGCTGCGCTATCGCGACTTCACGGCGGTCTTCGCGGGCAACGACCAGATGGCGCTGGGCTTCCTGCACGCGTGCCGCGAGCTCGGCATCCGCACTCCCGAGGAGATCAGCGTCGTGGGCTTCGACGACATCCCCGAGGCTGCGCACTTCGCACCTCCCCTGACCACCGTCAGGCAGGACTTCGCCGAGATCGGCAGGCAGGCCATGACCATGCTGCTGGCGCTGATCGGCGGCGGTGAGGGCGAGCTCACCCGCGTGATGCCCGAGCTCGTGGTGCGAAGTTCGACGGCATCCGCACCGCCTGCGCCTCTCTCGCTCTGA
PROTEIN sequence
Length: 350
VTVRIRKGTIVDRVRAPNIRDVARLAGVSYQTVSRVLNDSPNIRDATKDRVLAAIDELGYRPNQAARTLVTSRSQTIGVLTSMSVHYGPTTAINALEQSARDAGYRMSLTTLASSDDAAIRSSLDFLMSQGIEGLVVIAPQERIIQALEDAAITIPTITLDTSGRASGHSVGVDQIAGARLATQHLIDLGHTDIVHIAGPRDWIEADARMRGYLQTLSDADLRTRAPILGDWSAGFGYYAGKELLRYRDFTAVFAGNDQMALGFLHACRELGIRTPEEISVVGFDDIPEAAHFAPPLTTVRQDFAEIGRQAMTMLLALIGGGEGELTRVMPELVVRSSTASAPPAPLSL*