name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids2_trim150_scaffold_86_31
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria
|
Not on your lists |
16039..16983
----------------- DNA (945bp) protein (315aa) |
rpoA; DNA-directed RNA polymerase, alpha subunit/40 kD subunit; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
rbh
DNA-directed RNA polymerase subunit alpha n=1 Tax=Microbacterium barkeri RepID=UPI000313FA41
rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
|
|
scnpilot_solids2_trim150_scaffold_86_32
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
17019..17696
----------------- DNA (678bp) protein (226aa) |
50S ribosomal protein L17 n=1 Tax=Glaciibacter superstes RepID=UPI0003B6FB01
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
|
|
scnpilot_solids2_trim150_scaffold_86_33
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(17802..19379)
----------------- DNA (1578bp) protein (526aa) |
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000318F949
rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM73271.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
|
|
scnpilot_solids2_trim150_scaffold_86_34
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(19432..20724)
----------------- DNA (1293bp) protein (431aa) |
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D333B5
rbh
Uncharacterized protein {ECO:0000313|EMBL:EYT60006.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
Two-component system, sensor histidine kinase,possibly regulating citrate/malate metabolism
|
|
scnpilot_solids2_trim150_scaffold_86_35
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
20882..21898
----------------- DNA (1017bp) protein (339aa) |
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBM9_9MICO
rbh
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:KJQ54081.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein; K07795 putative tricarboxylic transport membrane protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_36
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
21900..22445
----------------- DNA (546bp) protein (182aa) |
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K219_9MICO
Tripartite tricarboxylate transporter TctB family protein {ECO:0000313|EMBL:KJQ54082.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein; K07794 putative tricarboxylic transport membrane protein
|
|
scnpilot_solids2_trim150_scaffold_86_37
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria
|
Not on your lists |
22445..23998
----------------- DNA (1554bp) protein (518aa) |
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E79C85
rbh
hypothetical protein
rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
|
|
scnpilot_solids2_trim150_scaffold_86_38
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
24041..24829
----------------- DNA (789bp) protein (263aa) |
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003114F71
rbh
Sulfite exporter TauE/SafE {ECO:0000313|EMBL:KJL29753.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
permease; K07090
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_39
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
24886..25338
----------------- DNA (453bp) protein (151aa) |
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034868FF
UPF0336 protein RU09_06765 {ECO:0000256|HAMAP-Rule:MF_00799}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_86_40
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
25338..25739
----------------- DNA (402bp) protein (134aa) |
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030EFB96
Acyl dehydratase {ECO:0000313|EMBL:KDA07092.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
acyl dehydratase
|
|
scnpilot_solids2_trim150_scaffold_86_41
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
25741..26883
----------------- DNA (1143bp) protein (381aa) |
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K208_9MICO
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_42
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
26916..27260
----------------- DNA (345bp) protein (115aa) |
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C41B7
Uncharacterized protein {ECO:0000313|EMBL:KJL22297.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_86_43
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(27336..28538)
----------------- DNA (1203bp) protein (401aa) |
Aspartate aminotransferase {ECO:0000313|EMBL:KJL23270.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KJL23270.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
aspartate aminotransferase n=1 Tax=Microbacterium barkeri RepID=UPI000314066C
rbh
aspC; aspartate/tyrosine/aromatic aminotransferase
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_44
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(28576..28992)
----------------- DNA (417bp) protein (139aa) |
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F6F1FF
Uncharacterized protein {ECO:0000313|EMBL:KJL23271.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_86_45
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(29063..29527)
----------------- DNA (465bp) protein (155aa) |
4-hydroxy-4-methyl-2-oxoglutarate aldolase {ECO:0000256|RuleBase:RU004338, ECO:0000256|SAAS:SAAS00063993}; Short=HMG aldolase {ECO:0000256|RuleBase:RU004338};; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004338};; EC=4.1.3.17 {ECO:0000256|RuleBase:RU004338, ECO:0000256|SAAS:SAAS00063993};; Oxaloacetate decarboxylase {ECO:0000256|RuleBase:RU004338}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
ribonuclease n=1 Tax=Promicromonospora sukumoe RepID=UPI00037DFCD3
ribonuclease activity A regulator; K02553 regulator of ribonuclease activity A
|
|
scnpilot_solids2_trim150_scaffold_86_46
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(29700..31295)
----------------- DNA (1596bp) protein (532aa) |
Isocitrate lyase {ECO:0000313|EMBL:KJL33279.1}; EC=4.1.3.1 {ECO:0000313|EMBL:KJL33279.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
isocitrate lyase (EC:4.1.3.1)
rbh
isocitrate lyase n=1 Tax=Microbacterium yannicii RepID=UPI00031CDEEF
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_47
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(31325..32983)
----------------- DNA (1659bp) protein (553aa) |
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
malate synthase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003652E68
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_48
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
33114..34565
----------------- DNA (1452bp) protein (484aa) |
XRE family transcriptional regulator n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBL1_9MICO
rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:EQM73249.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
transcriptional regulator
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_49
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(34636..36129)
----------------- DNA (1494bp) protein (498aa) |
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DC85C5
rbh
Purine catabolism regulatory protein-like family protein {ECO:0000313|EMBL:KJL23278.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
regulator of polyketide synthase expression; K09684 purine catabolism regulatory protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_50
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
36226..37584
----------------- DNA (1359bp) protein (453aa) |
4-aminobutyrate aminotransferase GabT {ECO:0000313|EMBL:KJL33271.1}; EC=2.6.1.19 {ECO:0000313|EMBL:KJL33271.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
gabT; 4-aminobutyrate aminotransferase; K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22]
rbh
4-aminobutyrate aminotransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034499FD
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_51
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
37669..39141
----------------- DNA (1473bp) protein (491aa) |
gabD; succinate-semialdehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
rbh
aldehyde dehydrogenase n=1 Tax=Microbacterium paraoxydans RepID=UPI00036DB38E
rbh
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KDA07102.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
|
|
scnpilot_solids2_trim150_scaffold_86_52
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
39169..40530
----------------- DNA (1362bp) protein (454aa) |
Succinate-semialdehyde dehydrogenase [NADP(+)] 1 {ECO:0000313|EMBL:KJL23283.1}; EC=1.2.1.79 {ECO:0000313|EMBL:KJL23283.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
NAD-dependent aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCC3_9MICO
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_53
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
40718..42442
----------------- DNA (1725bp) protein (575aa) |
Pyruvate dehydrogenase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBJ3_9MICO
rbh
Pyruvate dehydrogenase {ECO:0000313|EMBL:EQM73229.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
|
|
scnpilot_solids2_trim150_scaffold_86_trna_1
unknown
|
Not on your lists |
42616..42688
----------------- DNA (73bp) |
transferRNA Trp
|
|
scnpilot_solids2_trim150_scaffold_86_54
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
42730..42996
----------------- DNA (267bp) protein (89aa) |
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034BF101
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
|
|
scnpilot_solids2_trim150_scaffold_86_55
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
43044..44090
----------------- DNA (1047bp) protein (349aa) |
transcription antitermination factor NusG n=1 Tax=Microbacterium barkeri RepID=UPI0002EB9218
rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
nusG; transcription antiterminator; K02601 transcriptional antiterminator NusG
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_56
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
44212..44643
----------------- DNA (432bp) protein (144aa) |
50S ribosomal protein L11 n=1 Tax=Microbacterium barkeri RepID=UPI0003703F1A
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
|
|
scnpilot_solids2_trim150_scaffold_86_57
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria
|
Not on your lists |
44655..45344
----------------- DNA (690bp) protein (230aa) |
50S ribosomal protein L1 n=1 Tax=Microbacterium yannicii RepID=UPI0002FBF032
rbh
rplA; ribosomal protein L1; K02863 large subunit ribosomal protein L1
rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
|
|
scnpilot_solids2_trim150_scaffold_86_58
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
45542..46354
----------------- DNA (813bp) protein (271aa) |
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F66452
rbh
L-cystine-binding protein TcyA {ECO:0000313|EMBL:KJL20900.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
tcyA; amino acid ABC transporter periplasmic protein; K02424 cystine transport system substrate-binding protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_86_59
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
46364..47026
----------------- DNA (663bp) protein (221aa) |
Cysteine ABC transporter permease n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K1W8_9MICO
rbh
L-cystine transport system permease protein TcyB {ECO:0000313|EMBL:KJQ54117.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
polar amino acid ABC transporter inner membrane subunit; K10009 cystine transport system permease protein
rbh
|