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scnpilot_solids2_trim150_scaffold_86_31

Organism: SCNPILOT_SOLID2_TRIM150_Microbacterium_69_27

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 16039..16983

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase, alpha subunit/40 kD subunit; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 328.0
  • Bit_score: 553
  • Evalue 5.00e-155
  • rbh
DNA-directed RNA polymerase subunit alpha n=1 Tax=Microbacterium barkeri RepID=UPI000313FA41 similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 329.0
  • Bit_score: 576
  • Evalue 1.40e-161
  • rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10 similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 330.0
  • Bit_score: 574
  • Evalue 1.20e-160

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Taxonomy

BJP_08E140C01_10KDA_Microbacterium_68_10 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 945
GTGCTGATTGCACAGCGTCCCACTCTCACCGAGGAAAAGATCTCCGAGAACCGCAGCCGGTTCGTCATCGAGCCGCTGGAGCCCGGTTTCGGATACACGATCGGCAACACCACCATTCGCATCGATGGCGTGCTGCACGAGTTCAGCACGATCCCCGGTGTGAAGGAGGACGTGACCGAGATCATCCTCAACATCAAGCAGCTGGTCGTCTCCAGCGAGCGCGACGAGCCCATCACCGCGTACCTGCGCAAGACAGGTGCCGGTGAGGTGACCGCGGCCGACATCTCGGCCCCTGCCGGCGTCGAGGTGCACAACCCCGACCTGGTCATCGCCACGCTCAACGACACCGCTCGCTTCGAGCTGGAGCTCACCATCGAGCGCGGCCGCGGCTACGTGTCGGCGTCGCAGAACCGCAACGAGTACGCCGAGGCCGGTCAGATTCCGGTCGACTCGATCTACTCGCCCGTTCTGAAGGTCGCCTACCGCGTCGACGCCACCCGCGCCGGCGAGCGCACCGACTTCGACAAGCTCGTCCTCGACGTCGAGACGAAGTCGGCGATCAGCCCCCGCGACGCCGTCGCGTCGGCAGCCAAGACCCTCACCGAGCTGTTCGGACTCGCTCGCGAGCTGAACGTCGAGGCCGAGGGCATCGAGATCGGCCCCGCGCCGGTCGAGGCTGTCCTCTCCAGCGAGCTCTCCATGCCGATCGAGGACCTCGATCTGTCGGTGCGCTCGTACAACTGCCTCAAGCGCGAGGGCATCAACACGGTCTCGGAGCTGGTCGCCCTCTCCGAGACGCAGCTGATGAACATCCGCAATTTCGGACAGAAGTCGGTCGACGAGGTGCGCGACAAGCTCGTCTCGCTCGGTCTGTCGCTGAAGGATTCGGTGCCCGGTTTCGACGGCGCCCACTTCTACAGCGCAGGCGAAGACGAGTCCTTCTGA
PROTEIN sequence
Length: 315
VLIAQRPTLTEEKISENRSRFVIEPLEPGFGYTIGNTTIRIDGVLHEFSTIPGVKEDVTEIILNIKQLVVSSERDEPITAYLRKTGAGEVTAADISAPAGVEVHNPDLVIATLNDTARFELELTIERGRGYVSASQNRNEYAEAGQIPVDSIYSPVLKVAYRVDATRAGERTDFDKLVLDVETKSAISPRDAVASAAKTLTELFGLARELNVEAEGIEIGPAPVEAVLSSELSMPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVRDKLVSLGLSLKDSVPGFDGAHFYSAGEDESF*