ggKbase home page

scnpilot_solids2_trim150_scaffold_86_114

Organism: SCNPILOT_SOLID2_TRIM150_Microbacterium_69_27

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 107786..108244

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003463BAC similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 152.0
  • Bit_score: 243
  • Evalue 1.00e-61
Endoribonuclease L-PSP {ECO:0000313|EMBL:KJL28660.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 152.0
  • Bit_score: 253
  • Evalue 1.80e-64
putative endoribonuclease translation initiation inhibitor similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 151.0
  • Bit_score: 218
  • Evalue 1.40e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 459
GTGAGCATCGCAACCCGTCTTCAGGAGCTCGGCATCGAGCTGCCCGCCGTGGCAGCACCCGTCGCGGCCTACGTCCCCGCCGTCGCGCACGGCGGCCTGGTCTACACGTCCGGGCAGCTGCCGTTCGAAGGCGGTGAACTCCCCGCCACGGGCAAGGTCGGCGCCGAGGTCGACGCCGACGCGGCCAAGGGCTACGCCCGCACCTGCGCGCTGAACGCACTTGCGGCGGCGGCGGATGCCGCGGGCGGCGTCGACAAGCTGGCCGGCGTGCTCCGGGTGGGCGGCTTCGTGGCATCCGCTCCGTCCTTCACCGGTCAGTCCGGCGTGATCAACGGCGCCAGTGAGGTGCTCGGCGAGATCTTCGGCGATGCCGGCAGGCACGTCCGCGCCGCCGTGGGCATGGTGTCGCTGCCGCTGGACACCCCCGTCGAGGTCGAGGTCACGTTCATCCTCGCCTGA
PROTEIN sequence
Length: 153
VSIATRLQELGIELPAVAAPVAAYVPAVAHGGLVYTSGQLPFEGGELPATGKVGAEVDADAAKGYARTCALNALAAAADAAGGVDKLAGVLRVGGFVASAPSFTGQSGVINGASEVLGEIFGDAGRHVRAAVGMVSLPLDTPVEVEVTFILA*