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scnpilot_solids2_trim150_scaffold_50_15

Organism: SCNPILOT_SOLID2_TRIM150_Microbacterium_69_27

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 8409..9749

Top 3 Functional Annotations

Value Algorithm Source
Integrase/recombinase n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BBX6_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 445.0
  • Bit_score: 686
  • Evalue 2.20e-194
  • rbh
integrase/recombinase similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 445.0
  • Bit_score: 686
  • Evalue 7.10e-195
  • rbh
Integrase/recombinase {ECO:0000313|EMBL:CCE76120.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 445.0
  • Bit_score: 686
  • Evalue 3.10e-194

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1341
ATGGCCACCACTACCCGCAAGCGTGCCGCGCTGTACCTACGGCAGTCCAAGTCCGACGATGAAGGCATCGAGCGGCAGACCGAGCGCACCACCGCGCTAGCCACAGCACGCGGCTGGGTGGTGGTGGAGGCCTTCATCGACAACGACGTGAGCGCCAGCAAGCCACGCGGCAAGGGCACCGCCTGGGGACGCATGCTGGCAGCCGCTGACGGCCTGGATGTGGTGATCGGTGTGGACCTTGACCGCGTGGTGCGCTCCACCCGCGACCTGAACACCCTGATTGACCACGGGCTGATGCTGGTGACGCTTGACGGTGAGATTGACCTGACCACGGCTGACGGTGAGTTCAGGGCGTCCATGTTGGCGTCCATCGCCCGGTTCGAGGTCCGCCGCAAGGGCGAGCGCCAGAGCCGCGCCAATGCCCAGCGCGCGGCGAAGGGTGGCGTACCCAAGGGCACCCGCTTGAAGGGCTACACCACCGAGGGCGACGTGGTGCCAGATGAGGCCGACATGGTGCGCGCCCTGTTCGACGGCTTCAGCACGGGGCTGACGCTACGGTCGCTGTCACGGCAGCACGGCATCACCCCGAGCAGCGTGCGCACCATCCTGACTAACCCCCGTTACGCTGGCCGTCGGGTGTACAAGGGTGAGGTCGTAGGCGTGGGCGACTGGGAGGCGCTGGTGTCAGGTGAACTGTTCGACAGTGTGAACCGGCGCTTGGCCGACCCTGCCCGCCAGACCAACCGCACCGGCAGCACGGCACGTAAGCACCTGGGCACCAGCCTGTTCCGCTGTGGCGAGTGCGCGCGCGTGCTCACGGTGCAGCCCGGTGACCCTGCCCCCGATGGCCCCACGGTGCGCACTGCTGGCAGCGGTGGCCGGTACGCCTGCCCCGTGTGCCGTCTGAACCGATCCCTGGAGGCCGTGGACGACTTCGTGTTGCGGCTGGCGCGGGCACGCCTGGCCGATCCGGCGTTCCTTGCTGCACTGGCCCCCGATGTGGACACCGACCACCTACGCACCGAGCAAGCCGCACTGACCGACCGCAAGGCCACACTCGCGGGCTTGGTGGCCGACGGCACCATGTCGCGTGATGAGGTCAGGGAGGCCGTTGCGGGGCTGAACGCACGCCTGGCCGAGCTTGATCAGGCGCTTACAGGTGCCAGCCGACCGGTGGACGTGGTGGCCGAGTACAAGGCCATGCTAGACAGCTTCGACTCGCTGAACCTTGACCGGCAGCGGGCGCTCATCGACACGCTTATGACGGTGTACCTGCTGCGCTCGCCCCGTGGTCGGAAGGGCTTCGACCCCGGGACCGTGCGCGTGGTGTGGCGTGCGTAG
PROTEIN sequence
Length: 447
MATTTRKRAALYLRQSKSDDEGIERQTERTTALATARGWVVVEAFIDNDVSASKPRGKGTAWGRMLAAADGLDVVIGVDLDRVVRSTRDLNTLIDHGLMLVTLDGEIDLTTADGEFRASMLASIARFEVRRKGERQSRANAQRAAKGGVPKGTRLKGYTTEGDVVPDEADMVRALFDGFSTGLTLRSLSRQHGITPSSVRTILTNPRYAGRRVYKGEVVGVGDWEALVSGELFDSVNRRLADPARQTNRTGSTARKHLGTSLFRCGECARVLTVQPGDPAPDGPTVRTAGSGGRYACPVCRLNRSLEAVDDFVLRLARARLADPAFLAALAPDVDTDHLRTEQAALTDRKATLAGLVADGTMSRDEVREAVAGLNARLAELDQALTGASRPVDVVAEYKAMLDSFDSLNLDRQRALIDTLMTVYLLRSPRGRKGFDPGTVRVVWRA*