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scnpilot_solids2_trim150_scaffold_4228_15

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(14641..15333)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJU4_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 228.0
  • Bit_score: 289
  • Evalue 3.20e-75
winged helix family two component transcriptional regulator; K07669 two-component system, OmpR family, response regulator MprA similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 228.0
  • Bit_score: 289
  • Evalue 9.90e-76
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEA26969.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 228.0
  • Bit_score: 289
  • Evalue 4.40e-75

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGAGTCCCCACGTCGTCATCGCGGACGACGATCGCGCCATCCGGGAGTCGTTGGAGCGCGCGCTCGCGTTGGAGGGCTATCGGGTGACTCTTGCCGCGGACGGCGTGGCCGCAGCCGTCGCCGCGCGCGGCCCGGACGTCGACGCGATCGTCCTGGACATCGGCATGCCGCTGATCGACGGCCTGGGCGTCACCCAGCTGTTGCGCGCAGAAGGCGTCACCACACCGATCCTGATGCTCACGGCGCGAGTATCCGTCGATGCCCGGGTCGCGGGTCTGGACGCCGGGGCGGACGACTACCTGCCCAAACCGTTCGACCTCGACGAACTGCTGGCCCGGCTGCGGGCGCTGCTGCGCCGCAGCCGGCTCGCCGGGGCCGGCGATGAACCAGATGACGACCTCACGCTGTCCCTGCTGCACCTCGACGTGGCAGCACGGCGCGCCTGGTGGGCGACCACGGAGATCGCCCTGTCCAAGACCGAGTTCGACCTGTTGGAGCTGCTGGTCCGCAACCGCGGGCATGCCCTGACCCACGCGCTGATCTACGACCGGATATGGCAGTACGACTTCGGCCCGGACTCGAACAACCTCGCCGTCTACGTCAGCTATCTGCGGCGGAAGCTGCAGGCGGCCGGCGCGCCCGAGATGATCCGCACGGTTCGCGGTGTCGGATACCGGCTGGACGAGCCGTGA
PROTEIN sequence
Length: 231
MSPHVVIADDDRAIRESLERALALEGYRVTLAADGVAAAVAARGPDVDAIVLDIGMPLIDGLGVTQLLRAEGVTTPILMLTARVSVDARVAGLDAGADDYLPKPFDLDELLARLRALLRRSRLAGAGDEPDDDLTLSLLHLDVAARRAWWATTEIALSKTEFDLLELLVRNRGHALTHALIYDRIWQYDFGPDSNNLAVYVSYLRRKLQAAGAPEMIRTVRGVGYRLDEP*