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scnpilot_solids2_trim150_scaffold_8387_5

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(2959..4185)

Top 3 Functional Annotations

Value Algorithm Source
pilus biosynthesis protein PilC n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B32926 similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 406.0
  • Bit_score: 538
  • Evalue 5.30e-150
tapC; type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 402.0
  • Bit_score: 441
  • Evalue 3.60e-121
Type II secretion system protein {ECO:0000313|EMBL:AGL14723.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 402.0
  • Bit_score: 441
  • Evalue 1.60e-120

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Taxonomy

Actinoplanes sp. N902-109 → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1227
ATGACAGTCGCGTCGTTCACGTACCAGGCGCTCGACTCCACGGGCAAGCTCATCAAGGGCAGCATGGAGTCCGAGAGCGCCGATGCCGTGGCACAAGCACTGTCCGTGCGGCGGCTCACGCCCACGTCCATCACGAAGGCGGGCTCCGGCCTGCAGCGCGAGATCCGCATCCCAGGCCTGAAGAAACGCACCAAGCCGAAAGACCTGGCGATCATCACCCGCCAGTTCGCGTCGATGACGTCGGCCGGCCTGTCCATCCTGCGGTCGCTGGCGATCCTGGAGGAGCAGGTCTCCAAGCCGGGCCTGAAGGCCGCGATCGCCCGGGTGCGCGCCGATGTGCGGCACGGCGCCACGCTCTCGGCGGCGATGGGCGCACACCCCGACCACTTCCCCAGCCTCATGGTCAACATGATCAAGGCCGGCGAGACCGGCGGCTTCCTGGACGACGCATTGTCCCGCATCGCCACCATGTACGAGGCGGACGCCGAGCTGCGCTCCAAGATCAAGGGCGCCATGACGTATCCCGTCATCGTGCTGCTGTTCTCGCTGCTGCTGGGCACCGGCGTGATCGTGTTCATCGTGCCGGTCTTCGAGCACATGTTCGCCCAGCTGGGTGGCCAGTTGCCGCTGCCCACGCAGATCCTGGTGACCCTCTCGCACAACGCCTACTGGTGGGTGCCGCTGCTGCTGGTTGCCTCGATCGGCGGGTTCATCGCCTTCCGCAAGACCTACCGCGGTAATGACGCATTCCGCCTGCGGGTGGACCGGATCAAGCTGAAGGTCCCGGTCTTCGGGCCGCTGTTCACCAAGATCGCGCTGGCCCGCTGGGCGCGCAACCTCGGCACCCTGCTGCAGGTGGGAGTGCCGGCACTGCAGGCCCTCGAGGTGGTGGGCGGCACCACCGGCAACGCCGTGGTCGCCGCGGCCATGGACGACGTCCGCGCCGCGATCCGCGCCGGGCGCACCATGTCCGAGCCGATCAGCAAGCAGGCGGTCTTCCCGCCGATGATCGCGCAGATGGTTGAGGTCGGCGAAGAAACAGGCCAACTCACTGAAATGCTCGATAAAGCTGCCGATTACTACGACCACGAGGTGAAGACCGCCACCGACGCGCTGACCTCCGCGATGGAGCCGCTGATGGTGGTGGTCCTGGGTGCGGTGATCGGATCCATGGTCCTCGCGCTGTACCTGCCGATGTTCACGATCTACCAGAACATCGGCAGTTGA
PROTEIN sequence
Length: 409
MTVASFTYQALDSTGKLIKGSMESESADAVAQALSVRRLTPTSITKAGSGLQREIRIPGLKKRTKPKDLAIITRQFASMTSAGLSILRSLAILEEQVSKPGLKAAIARVRADVRHGATLSAAMGAHPDHFPSLMVNMIKAGETGGFLDDALSRIATMYEADAELRSKIKGAMTYPVIVLLFSLLLGTGVIVFIVPVFEHMFAQLGGQLPLPTQILVTLSHNAYWWVPLLLVASIGGFIAFRKTYRGNDAFRLRVDRIKLKVPVFGPLFTKIALARWARNLGTLLQVGVPALQALEVVGGTTGNAVVAAAMDDVRAAIRAGRTMSEPISKQAVFPPMIAQMVEVGEETGQLTEMLDKAADYYDHEVKTATDALTSAMEPLMVVVLGAVIGSMVLALYLPMFTIYQNIGS*