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scnpilot_solids1_trim150_scaffold_2273

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2273_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..98)
DNA (96bp) protein (32aa)
Elongation factor Tu n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWT2_9GAMM
translation elongation factor TU
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
scnpilot_solids1_trim150_scaffold_2273_trna_3
unknown

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comp(175..247)
DNA (73bp)
transferRNA Thr
scnpilot_solids1_trim150_scaffold_2273_trna_2
unknown

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comp(375..445)
DNA (71bp)
transferRNA Gly
scnpilot_solids1_trim150_scaffold_2273_trna_1
unknown

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comp(467..549)
DNA (83bp)
transferRNA Tyr
scnpilot_solids1_trim150_scaffold_2273_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(594..1082)
DNA (489bp) protein (163aa)
Acyl-CoA hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2R6_9GAMM rbh
Acyl-CoA hydrolase {ECO:0000313|EMBL:EIL93757.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acyl-CoA hydrolase
scnpilot_solids1_trim150_scaffold_2273_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1229..3544
DNA (2316bp) protein (772aa)
Protein serine/threonine phosphatase with Cache sensor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2R7_9GAMM rbh
Protein serine/threonine phosphatase with Cache sensor {ECO:0000313|EMBL:EIL93758.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
serine phosphatase RsbU, regulator of sigma subunit
scnpilot_solids1_trim150_scaffold_2273_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3541..3930
DNA (390bp) protein (130aa)
Anti-sigma factor antagonist n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2R8_9GAMM
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
serine phosphatase RsbU, regulator of sigma subunit
scnpilot_solids1_trim150_scaffold_2273_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3941..5935)
DNA (1995bp) protein (665aa)
peptidase t2 asparaginase 2; K13051 beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5] rbh
Peptidase t2 asparaginase 2 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2R9_9GAMM rbh
Peptidase t2 asparaginase 2 {ECO:0000313|EMBL:EIL93760.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_2273_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6017..6655
DNA (639bp) protein (213aa)
Two-component system regulatory protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2S0_9GAMM rbh
Two-component system regulatory protein {ECO:0000313|EMBL:EIL93761.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
two-component system regulatory protein
scnpilot_solids1_trim150_scaffold_2273_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6633..7685
DNA (1053bp) protein (351aa)
Two-component system sensor protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2S1_9GAMM rbh
Two-component system sensor protein {ECO:0000313|EMBL:EIL93762.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Fe2+-dicitrate sensor, membrane component rbh
scnpilot_solids1_trim150_scaffold_2273_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7908..9326
DNA (1419bp) protein (473aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2S2_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EIL93763.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB-dependent receptor
Displaying 11 items

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