ggKbase home page

scnpilot_solids1_trim150_scaffold_324_12

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 12976..13638

Top 3 Functional Annotations

Value Algorithm Source
Anti-ECFsigma factor ChrR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 220.0
  • Bit_score: 368
  • Evalue 5.10e-99
Anti-ECFsigma factor ChrR {ECO:0000313|EMBL:EIL92010.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 220.0
  • Bit_score: 368
  • Evalue 7.20e-99
anti-ECFsigma factor, ChrR similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 220.0
  • Bit_score: 348
  • Evalue 1.70e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGAAGCCGAATCACCATCTCGACGATGCCACGTTGCTCAGCTATTCGGCGGGCGCATTGCCGACGGCGCTGGCGGTGGTCGCTTCCTCGCATCTCGAACGTTGCAAAACGTGCCGTGAGCAGCTGCGCGACGCCGACCAGATTGGTGGCGCACTCATGCAGCAACAGCGTGTGGGGACGCCGGCGCCGGTTGCACGCGCTGCCATGCTCGCGCTGCTCGAGGATGAGCAGCAGGGGGGGCCTGTGACCCTATCCACCGACATGGTGGAAGAGCGTGATCCGGACCGCCTGCCTGGCGCACTGCATCCATGGTTCGGCAATTCCATGCGCGCCTTGCAGTGGCGCCGCGTCGCGCCGGGCGTGCAACGTATCCTGGCCAAGGACGTGCGCGGTGGCGACCTGATGTTGTTGCGCATTGCGCCGGGCAGCAAACTGCCCCTGCACAGCCACGGCGGCAACGAGCTGACCATGATCCTGGATGGCGCCTACGACGACTTGCTCGGTCACTTCGGGCCGGGCGACGTGGCCGATCTGGATGGCGAAACGCTGCATCAGCCAGTGACCTCTCCGGGTGTCCCATGCATTTGCGTGGCCGCCACCGATGCGCCGCTGGTCTTTTCCGGCTGGCTGGCGCGCACATTGCAACCCCTGTTCGGATTCTGA
PROTEIN sequence
Length: 221
MKPNHHLDDATLLSYSAGALPTALAVVASSHLERCKTCREQLRDADQIGGALMQQQRVGTPAPVARAAMLALLEDEQQGGPVTLSTDMVEERDPDRLPGALHPWFGNSMRALQWRRVAPGVQRILAKDVRGGDLMLLRIAPGSKLPLHSHGGNELTMILDGAYDDLLGHFGPGDVADLDGETLHQPVTSPGVPCICVAATDAPLVFSGWLARTLQPLFGF*