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scnpilot_solids1_trim150_scaffold_2581_12

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingopyxis_65_37

partial RP 38 / 55 BSCG 38 / 51 MC: 1 ASCG 4 / 38
Location: comp(9001..9747)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma 28 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W3X2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 248.0
  • Bit_score: 473
  • Evalue 1.30e-130
  • rbh
RNA polymerase subunit sigma 28 {ECO:0000313|EMBL:ENY82202.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 248.0
  • Bit_score: 473
  • Evalue 1.80e-130
RNA polymerase subunit sigma 28; K02405 RNA polymerase sigma factor for flagellar operon FliA similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 248.0
  • Bit_score: 368
  • Evalue 2.40e-99
  • rbh

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGAAAATTGAGCCCGCCGAGCAATTTGCGGGAAAGACCGCGCACGCCCTGCGGCCGCACGGCTATGGCGAGAATGTCGAGGCGCTGATCGCCGAACATGCGCCGCTCGTGCGCAAGATCGCCTGGCAGGTTCATTCGCGCGTGTCGCGGACGAGCGATCTTGAGGATCTGATCCAGGTCGGGCTGATCGCGCTGATCGAAGCGAGCCGTACCTATGAAGAGCGCGGCTTCGCCTTTACCACCTATGCATCGACGCGCATTCGCGGCGCAATGATCGACCAGCAGCGGCGCGAGGCCGACGTCGGACGCGCCGCGATGGCGGCCGCCAAGCGGATCGCGGCGACGCGCGCCGCGCTCGAACAACAGCTGATGCGGGCGCCAGGCGCCGCCGAAATGGCCGAAGCGATGGGGATGGGTGCCGAGGAATATTTCGAGTTCGAACGCAGCGCGACGCACGGCCGCTCGACCTCGCTCGACGAAATGATGAACGAAGGCGATTTCCTGTTCGCCGACGACCGGCTCGGCGCCGGCGAGCTGCTCGAACAGGAAGGAATGCTCGACGCGCTGCGCGCCTGCATCGGGCGCCTGTCGGACCGCGAACAGATGGTCCTGCAGCTCTATTTCTTCGAAGAGCTCAATCTGCAGGAAATCGGGCTGACGCTCGACGTCAGCGCGGCGCGGGTCTGCCAGATCAAGCGCGACGCGATGGCCAGGATCGACCGCATGATGCGCGAAATGACCGAATGA
PROTEIN sequence
Length: 249
MKIEPAEQFAGKTAHALRPHGYGENVEALIAEHAPLVRKIAWQVHSRVSRTSDLEDLIQVGLIALIEASRTYEERGFAFTTYASTRIRGAMIDQQRREADVGRAAMAAAKRIAATRAALEQQLMRAPGAAEMAEAMGMGAEEYFEFERSATHGRSTSLDEMMNEGDFLFADDRLGAGELLEQEGMLDALRACIGRLSDREQMVLQLYFFEELNLQEIGLTLDVSAARVCQIKRDAMARIDRMMREMTE*