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scnpilot_solids1_trim150_scaffold_1291_16

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(12483..14258)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 586.0
  • Bit_score: 812
  • Evalue 5.00e-232
RNAse R (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 586.0
  • Bit_score: 794
  • Evalue 3.20e-227
Ribonuclease R n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIR1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 586.0
  • Bit_score: 812
  • Evalue 3.60e-232

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1776
GTGGAAGGCAAGCAAGGCCCCGATGTCTCGCAGGTGAACAACGGCGAGTCACTGGCCGGGCCGATGGCGCGCGCGGGCCAGATCGTGATCGCCGAAATCACCGAACCGCCGACGTCGCAACGTGGACCGATCGGCCGCATCGTGTCGGTGCTGGGCGAGCGGCTGGCGCCTTCGCTGATCGTCGAGATGGCGATCGAGAGCCATGGCCTGCCGCACGAATGGCCAGTCGAGGTGACGCGCGCCGCCGAAGCCGTCGAGCCGCGCGTCACGTCGGCCGAACACGCGGGACGCGTGGACTTGCGCGGCGTTCCGCTGGTGACCATCGACGGCGCCGACGCGCGCGATTTCGACGATGCGGTGTACGCCGAACCGGTGCGTGGCGGCGGCTTCAAGCTGTTGGTCGCGATCGCCGACGTGTCGCACTACGTGCAACCGGAGACCCCGCTGGACGACGAGGCGTACCAGCGCGGGACGTCGGTGTATTTCCCCGGGTTCGTGGTGCCGATGCTGCCGGAGACGCTTTCCAACGGGATCTGCTCGCTGAACCCGGACGTCGAGCGCCTGTGCATGGTCTGCGAGATGCGTGTCGGGGCGACCGGCGAGGTGACCCGATCGAAGTTCTATCCGGGCCTGATGCGTTCGCACGCGCGCCTGACCTATGACGGGGTGTGGCGCGCCATCGGTGAACGCGATGCCGAAGCGCGGCGCGGCCTCGGCAAGCTGCTGCCGCACATCGACCACCTGCACGCGCTATACAAGGCATTCGATGCCGCGCGCAAACGTCGCGGCACCATCGAGTTCGAGACCAGCGAGGTCGACTACCGGCTGGATGACAAGGGCGAGGTGGTTTCGCTGGGTTCCCACGAACGCAACGACGCGCACAAGTTGATCGAGGAATGCATGATCGCCGCCAACGTCGAGGCGGCGAAGTTCCTCGCGAAGAAGAAAATCCCCGCGCCGTTCCGGGTGCACGCGCCGCCGCCCGCCGACAAGTACGAAGACCTGCTGGCTTTCCTGCGCGAATACAAGTTGAAGCTGCCGCCGGTCAGCGAAGTGCGGCCGCGCGATTTCGCTGCGCTGCTGAAGCGTGTGGCGGACCGCCCCGACGCCGAGTTGTTCCGCAGCGTACTGCTGCGCGCGCAAAGCCTCGCCAGCTACCAGCCGGCCAACCACGGGCACTTCGGCCTGGCGCTGGACGCCTACGCGCATTTCACCTCGCCGATCCGGCGTTATCCCGATTTGCTGGTGCACCGCGCGATCCGCTACGCGCTGGCGGGCGGCAAGCCGGCCGCGTACCTGTACACCGAGAGCAAGATGGCGACCATGGCCGCGCACTGCTCGCGCACCGAGCGGCGCGCCGAGGAAGCCGAGCGCGACGTCGACGAGCGCTACAAGTGCGCGTGGATGGAGCAGCACGTCGGCGCCGAGTTCGACGGCATCATCACCGGCGTCACTTCGTTCGGACTGTTCGTGGAATTGACCGAATCGAAAGTGTCGGGGTTGGTGCACATTACCCAGTTGCGCAACGACTACTACCATTTCGACGCACGCCGGCACGAATTGCGCGGGGAGCGTACCGGCACGGTGTTCCGGCTCGGCGACGCGGTGCGCGTGCAGGTGCTGCGCGCCAGCATGGAGGATCGCCGGATCGATTTCCGGTTGGTGAGCAATGATTCCTTCCCCCGCTTGCGGGGGAAGCCGCCATCCATGGCCAAAAACTCCGTGGTGCCGAAGGCGGATGGGGGCAGTTATCGCGTGCAAACGAGCAAGGAATGA
PROTEIN sequence
Length: 592
VEGKQGPDVSQVNNGESLAGPMARAGQIVIAEITEPPTSQRGPIGRIVSVLGERLAPSLIVEMAIESHGLPHEWPVEVTRAAEAVEPRVTSAEHAGRVDLRGVPLVTIDGADARDFDDAVYAEPVRGGGFKLLVAIADVSHYVQPETPLDDEAYQRGTSVYFPGFVVPMLPETLSNGICSLNPDVERLCMVCEMRVGATGEVTRSKFYPGLMRSHARLTYDGVWRAIGERDAEARRGLGKLLPHIDHLHALYKAFDAARKRRGTIEFETSEVDYRLDDKGEVVSLGSHERNDAHKLIEECMIAANVEAAKFLAKKKIPAPFRVHAPPPADKYEDLLAFLREYKLKLPPVSEVRPRDFAALLKRVADRPDAELFRSVLLRAQSLASYQPANHGHFGLALDAYAHFTSPIRRYPDLLVHRAIRYALAGGKPAAYLYTESKMATMAAHCSRTERRAEEAERDVDERYKCAWMEQHVGAEFDGIITGVTSFGLFVELTESKVSGLVHITQLRNDYYHFDARRHELRGERTGTVFRLGDAVRVQVLRASMEDRRIDFRLVSNDSFPRLRGKPPSMAKNSVVPKADGGSYRVQTSKE*