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scnpilot_solids2_trim150_scaffold_44_3

Organism: SCNPILOT_SOLID2_TRIM150_Xanthomonadales_66_14

near complete RP 46 / 55 BSCG 45 / 51 ASCG 11 / 38
Location: comp(7180..7905)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Schlesneria paludicola RepID=UPI00029A77F8 similarity UNIREF
DB: UNIREF100
  • Identity: 35.4
  • Coverage: 246.0
  • Bit_score: 136
  • Evalue 3.60e-29
Uncharacterized protein {ECO:0000313|EMBL:AKC86166.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.7
  • Coverage: 231.0
  • Bit_score: 178
  • Evalue 8.80e-42
DNA-directed RNA polymerase subunit sigma24 similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 233.0
  • Bit_score: 123
  • Evalue 7.60e-26

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGAGCCCAGCCGCCGACCACCTGCTCGAGGATTTCACCCGGACACGCTGGTCGATGGTGTGCCGGTTGCAAACCACCCGCGCCGGCGACGCGCGCGAGGCGCTGACCGAGCTGGCGTTGCGCTACTGGTATCCGGTTTACGCCTACGTCCGGCGCTGCGGCCATGCGCAGGAAATCGCGCAGGACATCACCCAGGTTTTCCTGCAGCAGGTGGCCGCCGATTTGCGCAACCACCGCAATACGCCGCCCGGCCGGTTCCGCGAATGGCTGTTGGCGCGCCTCAACACCTTTCTCGGCGGCGAGTGGCGGGAACTCGCGGGCGCGGAAGGCGCTCCCGAGGCGCCGCCCTTGCCCGAGCTCGAATCGCGCAACCGCAGCGAACACGATCCGGAGGAATCGCCGGAGCAAGCCTATCGGCGCAGTTTCGCGCTGGAAGTCTTGTCGCGCGGTTTGAAACGGCTGCGCGCCGAAGCGCGCCAGACCGGGCATCTCGACATGTGCGAGGCGCTGGAACCATTCCTGACGCGTGAACCGTTGCCGGGTCAGTACGACGAACTCGGCCACAAGCTGTCGATTCGTCCGCTCGCGCTGGTGATTGCATTGAAACGCCTGCGGCAGCGGTTCCGCGAACTGGTTCGCGAAGAGCTGGCCGACACGGTGACGTCCGCGGAAGAGTTGGCCGCCGAGCAGCAAGCGTTGCTGGTCGCGCTGGACCGGGGGCACTGA
PROTEIN sequence
Length: 242
MSPAADHLLEDFTRTRWSMVCRLQTTRAGDAREALTELALRYWYPVYAYVRRCGHAQEIAQDITQVFLQQVAADLRNHRNTPPGRFREWLLARLNTFLGGEWRELAGAEGAPEAPPLPELESRNRSEHDPEESPEQAYRRSFALEVLSRGLKRLRAEARQTGHLDMCEALEPFLTREPLPGQYDELGHKLSIRPLALVIALKRLRQRFRELVREELADTVTSAEELAAEQQALLVALDRGH*