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scnpilot_solids2_trim150_scaffold_44_18

Organism: SCNPILOT_SOLID2_TRIM150_Xanthomonadales_66_14

near complete RP 46 / 55 BSCG 45 / 51 ASCG 11 / 38
Location: 20927..21142

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X1R9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 67.0
  • Bit_score: 82
  • Evalue 1.40e-13
Putative Xre family DNA-binding protein {ECO:0000313|EMBL:GAM00889.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 67.0
  • Bit_score: 84
  • Evalue 6.70e-14
XRE family transcriptional regulator; K07729 putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 63.0
  • Bit_score: 67
  • Evalue 1.50e-09

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Taxonomy

Sphingomonas parapaucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 216
TTGACTGAGAGCCTGCACAACCGCGTGCGCGAGGTGCGTGAAGCCAGGGGCTGGACGCAGCTGCATCTGGCGGAGGTGATGGGCGTGAGCCGCAAGACGGTCAATACCATCGAAAACGGCGCGCTCAATCCGTCCACCTTCATTGCGTTGAAGCTGACACGCGCACTCGATGAGCCGGTCGAACGATTGTTCTGGCTCGCTCCACAGGAACCCTGA
PROTEIN sequence
Length: 72
LTESLHNRVREVREARGWTQLHLAEVMGVSRKTVNTIENGALNPSTFIALKLTRALDEPVERLFWLAPQEP*