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scnpilot_solids2_trim150_scaffold_1505_8

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 7498..8802

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX08_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 414.0
  • Bit_score: 716
  • Evalue 2.00e-203
Major facilitator superfamily permease {ECO:0000313|EMBL:EIL91749.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 414.0
  • Bit_score: 716
  • Evalue 2.80e-203
arabinose efflux permease family protein similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 426.0
  • Bit_score: 704
  • Evalue 1.90e-200

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
ATGATCGAACATGGCCTCGTGTTGCAGCGTGACATCACGGATGACCGGACTCTCGGTCGCCGCGACATCCGCACGCTGACCCTGGCGGCCCTGGGCGGCGCGCTGGAGTTCTACGACTTCGTGGTGTTCGTGTTTTTCGCGATCCCGCTGAGCCAGCTGTTCTTCCCGCACGACACCGCGCCGTGGCTGGCGCAGCTGCAGGTGTTCGGCATCTTCGCGGCGGGCTACCTCGCGCGGCCGCTGGGCGGCATCGTGATGGCCCACTATGGCGACAAGCTGGGGCGCAAGCGGATGTTCACGCTCAGCGTGTTCCTGATGGCGGTGCCCACGCTGGGTATCGGCCTGCTGCCGGTATACGCGCAGGTCGGCATGCTGGCGCCGCTGGCCTTGCTGTCGCTGCGGGTGGTGCAGGGCATCGCGGTGGGAGGCGAAGTACCCGGCGCGTGGGTGTTCGTGGCCGAGCACGTGCCGGCGCGACGGGTGGGATTTGCCTGCGCCAGCCTCACTTCGGGGCTGACCGTGGGCATCGTGATCGGCTCGCTGGCGGCGGCGGCGATCAACAGCCGGATGAGCCCGGCGACCGTGCTCGATTGGGGCTGGCGCGTGCCGTTCCTGGCCGGCGGCGTGTTCGGTTTCTTTGCGGTGTGGCTGCGGCGCTGGCTCAGCGAGACGCCGGTATTCGAGGCGATGCACGCCCGGCGAGAGCTGGCCAGCGGCTTGCCGCTGCGGCAAGTATTCGAGCAGCATTTTCCCAGTGTGCTGCTGTCGATGCTGGTGACCTGGATGCTCACCGCGGCGATCCTGGTGATCGTCCTGATGACGCCGTCGCTGGTGCAGTCGGTGTTCCATGTGGCGCCGGCGCGGGCGTTCCTCGGCAACACCGTGGCCTCCGTCGCGCTGGCGTTGGGCTGTCTGGGCTATGGCGTCCTGGCGGATCGAATCGGGTTTGCGCGCGCGCTGCTGTTCGGCGCGGCCGGCCTGGTGGTGTGCAGCTACGCGCTGTATCTGGATCTGCGCTTCGGGGCGGCGCATTTCCTCGTGCTGTACGCGCTCGCCGGGCTGGCCGTCGGCGTGGTCGGCGTGGTCCCGGCGCTGATGGTGGTGGCGTTCCCGCCCGCGGTGCGCTTCTCCGGATTGTCGTTCTCGTACAACATCGCCTACGCAGTGTTCGGCGGCATCACGCCGCCGCTGATCGGCCTGCTGGTGAAGCAGTTCGGCGTGCTGGCGCCGGCGCATTACGTGGCGTTCGCCGCGGTGATCGGGATGGGCGTGGCGTACACGCAACTTCGTCGCCGGCATGCGTAG
PROTEIN sequence
Length: 435
MIEHGLVLQRDITDDRTLGRRDIRTLTLAALGGALEFYDFVVFVFFAIPLSQLFFPHDTAPWLAQLQVFGIFAAGYLARPLGGIVMAHYGDKLGRKRMFTLSVFLMAVPTLGIGLLPVYAQVGMLAPLALLSLRVVQGIAVGGEVPGAWVFVAEHVPARRVGFACASLTSGLTVGIVIGSLAAAAINSRMSPATVLDWGWRVPFLAGGVFGFFAVWLRRWLSETPVFEAMHARRELASGLPLRQVFEQHFPSVLLSMLVTWMLTAAILVIVLMTPSLVQSVFHVAPARAFLGNTVASVALALGCLGYGVLADRIGFARALLFGAAGLVVCSYALYLDLRFGAAHFLVLYALAGLAVGVVGVVPALMVVAFPPAVRFSGLSFSYNIAYAVFGGITPPLIGLLVKQFGVLAPAHYVAFAAVIGMGVAYTQLRRRHA*