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scnpilot_solids2_trim150_scaffold_3848_2

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 638..1312

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 224.0
  • Bit_score: 368
  • Evalue 5.20e-99
Regulatory protein TetR {ECO:0000313|EMBL:EIL92923.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 224.0
  • Bit_score: 368
  • Evalue 7.30e-99
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 224.0
  • Bit_score: 342
  • Evalue 9.60e-92

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGACTATTTCAGGCAAACGCGCAAAACCGCCGCGCCGCGCCGGACGCCCCAGCGGCGACGACCAGGATCTGCGCCGGCATCTGCTGGATGCGGCGTTGGGGCAGTTCGCGCGCACAGGCATCGCCGCCACCTCGTTGCGGGCAATCGCCACCGAGGCGGGCGTTACCCCGGCGATGCTGCATTACTACTTCGGCGACAAGGCGCGGCTGCTGCATGCCGTGATCGACGAGCGCCTGCTGCCGGCGCTGGCGCCGCTGCGCGCGCAGCTGGAGCACGCCGGCGGTGACCCGGTCGCGTTGACCGAAGCATTCGTGCGCGGGATCAGCGACGTCGTGGCAAGCCATCCCTGGCTGCCGCCGCTGTGGGTGCGCGAAGTGCTGTGCGAGGGCGGTGCGCTGCGTGAGGTACTGTTCGACCGCGCCGTGCCGGGCGTGCCGCAGCTGCTGGCGCAACGCTTCGCCGCGGCGCAGGCAAATGGACGGCTGAACCCGGCGCTGGACCCACGCCTGCTGGTCGTCTCGCTGGTCGGCCTGACCCTGTTCCCTGCTGCCGGTGCGCCGATCTGGCGACGCGCATTCGATGCCGAGTCACTCGGCCCCGAGACCATGCTTCAACACACGCTGGCCTTGCTGGGGCAGGGCGTCGGCACGACGAAACGTGGAGAACCCGCATGA
PROTEIN sequence
Length: 225
MTISGKRAKPPRRAGRPSGDDQDLRRHLLDAALGQFARTGIAATSLRAIATEAGVTPAMLHYYFGDKARLLHAVIDERLLPALAPLRAQLEHAGGDPVALTEAFVRGISDVVASHPWLPPLWVREVLCEGGALREVLFDRAVPGVPQLLAQRFAAAQANGRLNPALDPRLLVVSLVGLTLFPAAGAPIWRRAFDAESLGPETMLQHTLALLGQGVGTTKRGEPA*