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scnpilot_solids2_trim150_scaffold_2213_19

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: comp(14087..14272)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 61.0
  • Bit_score: 130
  • Evalue 7.10e-28
DNA/RNA helicase, superfamily II (EC:5.99.1.-) similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 61.0
  • Bit_score: 122
  • Evalue 5.60e-26
ATP-dependent RNA helicase DeaD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ94_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 61.0
  • Bit_score: 130
  • Evalue 5.00e-28

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 186
ATGCCGAAGGAAATCTTCGAGCACCTGAAGAAGGTATGGGTGGTGCAGCAGCAGTTGCGCATCCACGAATGGGACGGCAGCGACACCGGCACCAGCGCACCGCCGGCGCACAAGCCGGGCGGCTTCAAGAAGCCCGGCAGCTTCAAGCCGCGGCCCGGCGCCGCCAAGCCGCCGCGGCGCAAGTAG
PROTEIN sequence
Length: 62
MPKEIFEHLKKVWVVQQQLRIHEWDGSDTGTSAPPAHKPGGFKKPGSFKPRPGAAKPPRRK*