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scnpilot_solids2_trim150_scaffold_2213_20

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: comp(14290..14688)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 123.0
  • Bit_score: 175
  • Evalue 4.10e-41
DNA/RNA helicase, superfamily II (EC:5.99.1.-) similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 118.0
  • Bit_score: 155
  • Evalue 9.90e-36
ATP-dependent RNA helicase DeaD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Q2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 123.0
  • Bit_score: 175
  • Evalue 2.90e-41

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
GAACACAACGTGCCGGCGGTCGAGATCGCCGCCGCGCTGGCGCGCATCGCCCAGGGCGACCAGCCGCTGCTGCTGGCGCCGCCGCCGAAGCGCGAGAAGTACGAGCCCGCCGCGCGCGAACGCGCCGAGCGCACCGCGCCGCGCGAGCGCGCCGGGCATGAAAAGCGCCCGCCCGCCGGGCACGAAGGCGCCGCCGGCCGCGCCCCCCGCGAGCACAAGCCGCACGAACACGCTGCCGCGCATGCCAACGAGCCGCGCGAGTCCGGCCACCGTCCGGTGCGCGCGCACGCCACCGAGCAGGGCAAGCGCACCTATCGCATCGAAGTCGGCCACGAGCACGGCGTGAAGCGGACAGCCAGTACATCGGCCGCCTCAGCATCCGCGACCACTACAGCCTGA
PROTEIN sequence
Length: 133
EHNVPAVEIAAALARIAQGDQPLLLAPPPKREKYEPAARERAERTAPRERAGHEKRPPAGHEGAAGRAPREHKPHEHAAAHANEPRESGHRPVRAHATEQGKRTYRIEVGHEHGVKRTASTSAASASATTTA*