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scnpilot_solids2_trim150_scaffold_4641_17

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: 12332..12463

Top 3 Functional Annotations

Value Algorithm Source
Efflux pump membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W045_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 43.0
  • Bit_score: 71
  • Evalue 2.00e-10
Efflux pump membrane protein {ECO:0000313|EMBL:EIL92836.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 43.0
  • Bit_score: 71
  • Evalue 2.80e-10
multidrug resistance efflux pump similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 43.0
  • Bit_score: 64
  • Evalue 7.60e-09

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 132
GTGCTGGCCACCGCCGCAGCGCCGCAGCCGGTGGCGCAGACCGACGTCTACGAGCAGATGGCCAGCAAGGCCGACGCGGAAGCGGAGCAGATCATCCGCGCCAACCTGCCCCACGCCACCGCCGCGAACTGA
PROTEIN sequence
Length: 44
VLATAAAPQPVAQTDVYEQMASKADAEAEQIIRANLPHATAAN*