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scnpilot_solids2_trim150_scaffold_4016_5

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: comp(2100..2678)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WW67_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 192.0
  • Bit_score: 359
  • Evalue 2.10e-96
  • rbh
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 192.0
  • Bit_score: 359
  • Evalue 6.50e-97
  • rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGG90514.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 192.0
  • Bit_score: 359
  • Evalue 2.90e-96

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGGACGACACCCGCAGCAGCTCCGACCGCGCGCTGGTCGACGCCGTGCTGGCCAACCGGCCGGGCGCGTTCGAACGGCTCGTGCGCGAATACCAGGGGCTGTGCTGGCACATCATCCAGCGCATGGTGCGCAACCCGGAGGACGCGCGCGAACTGTGCCAGGACACCTTCCTGCGCGTGCACCAGTGCCTGCACCAGTACCGCGGCGAGAGCGCGCTGAAATCCTGGATCGGCCGCGTGGCCTGGACCATCGCGTTGCGCCACCTGCAGCACAAGCGCATCGCGCTGGTCGACCAGGGCGAGGACGACGGTTGCGCACTGGTGGAAAACCTCGGCGACGGCTTCGACCTGGAAGCGGCCTGCGCGGACGCGGAAACGGCACGGCACCTGCACGCGGCGATCGAAGCGTTGCCGCCGTTGCAGCGCACTCTGCTGACGCTGTACTACCTCGAAGAGACGACCATCCCGGAGATCGCCCGGATCACCGGACTGGCCAGCGGCACCATCAAGAGCCACTTGTTCCGCTCTCGCCTGCGCCTGCGCGGCGCACTCGAAGCGCGGACCGGAGTTGCAGCATGA
PROTEIN sequence
Length: 193
MDDTRSSSDRALVDAVLANRPGAFERLVREYQGLCWHIIQRMVRNPEDARELCQDTFLRVHQCLHQYRGESALKSWIGRVAWTIALRHLQHKRIALVDQGEDDGCALVENLGDGFDLEAACADAETARHLHAAIEALPPLQRTLLTLYYLEETTIPEIARITGLASGTIKSHLFRSRLRLRGALEARTGVAA*