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scnpilot_solids2_trim150_scaffold_3768_2

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: 452..1462

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 336.0
  • Bit_score: 621
  • Evalue 7.20e-175
tRNA pseudouridine synthase D n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPH9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 336.0
  • Bit_score: 621
  • Evalue 5.10e-175
tRNA pseudouridine synthase, TruD family similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 336.0
  • Bit_score: 616
  • Evalue 5.20e-174

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
GTGCAAGAACTTCCCCATGCCTTCGGCGAACCGCCACTGACCGCCCGGTTGCGTGCCAGCCCCGAGGACTTCCAGGTCGAGGAGATCCTTGGCTACGACGCCGACGGTGCCGGCGAGCATGCCTTGCTGTGGGTGGAGAAGCGCGGCGCGAATACCGACTGGGTCGCGCGCGAATTGGCGAAATTCGCCGGCGTGCCGCCGGTCGCGGTGGGTTATGCGGGCTTGAAGGACCGCCATGCGGTGACCCGGCAGGCCTTCTCGGTGCAACTGGCGGGCAAGCCCGACCCGGACTGGTCGGCGTTTCCGCACGCGGAAGTGAAAGTGCTGGCGGCGACACGGCATTCGCGCAAGCTCAAGCGCGGCGCGTTGCGCGGCAATCGTTTCGTGCTGGTGCTGCGCGAAGTGCAGGGCAACCGCGCGGCGGCCGAACGGGTGCTGACGCAGATCGCCGCGCGCGGCGTACCCAATTATTTCGGCGAGCAGCGCTTCGGCCGCGAGGGCGGCAACGTGGCGCAGGCGCGGGCGATGTTCGGCGGGCGCCGGGTGGATCGGGACCAGCGTTCGTTCCTGCTGTCGGCTGCCCGTGCGCACATCTTCAATGGCGTGCTGGCGGCACGGGTCGAGCGCGGCACCTGGGATGCGCCGCTGGATGGCGAGATCTGGTCGCTGGCCGGTTCGCGCTCGTGGTTCGGCCCCGAGTCGTTCACCGAGGCGCTGGCCGGGCGGCTGGCCAGCGCCGACATCCACCCGTCCGGCCCGTTGTGGGGGCAGGGCGAACCGCCGAGCCAGGGCGAGGCCGGTGCGCTGGAACGCGAGATTGCCGCGGCGAACGGCGAGCTGGCCGCCGGCCTGGCGGCGGCGCGGATGGATCAGGAACGCCGGCCGCTGCGGTTGCTGCCGAAGGACCTGCGCTGGCGCTGGCTGGATGGCGATGCGCTGGAGCTGTCGTTCGAGCTGCCGTCCGGCGCGTACGCCACGGTGGTGGCGCGCGAGCTGGCCGCGACCGCGTAG
PROTEIN sequence
Length: 337
VQELPHAFGEPPLTARLRASPEDFQVEEILGYDADGAGEHALLWVEKRGANTDWVARELAKFAGVPPVAVGYAGLKDRHAVTRQAFSVQLAGKPDPDWSAFPHAEVKVLAATRHSRKLKRGALRGNRFVLVLREVQGNRAAAERVLTQIAARGVPNYFGEQRFGREGGNVAQARAMFGGRRVDRDQRSFLLSAARAHIFNGVLAARVERGTWDAPLDGEIWSLAGSRSWFGPESFTEALAGRLASADIHPSGPLWGQGEPPSQGEAGALEREIAAANGELAAGLAAARMDQERRPLRLLPKDLRWRWLDGDALELSFELPSGAYATVVARELAATA*