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scnpilot_solids2_trim150_scaffold_3768_10

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: 6145..6798

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 214.0
  • Bit_score: 394
  • Evalue 7.10e-107
23S rRNA methylase (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 214.0
  • Bit_score: 389
  • Evalue 8.70e-106
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPI8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 214.0
  • Bit_score: 394
  • Evalue 5.00e-107

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGGCCCGCAGCAAGAGCAGCGCAGTCTGGCTGCGTGAACACTTCAACGACGAATATGTGAAGAAGGCCCAAGCCGAGGGCCTGCGTTCGCGTGCGGTGTACAAGCTGGAGGAACTGATCGAGCGCGACCGCCTGCTGAAGCCGGGCATCAACGTGGTCGACCTCGGCGCGGCGCCGGGCAGTTGGTCACAGCTGGTGCGCAACCGGCTAGGCGACAGCGGCAAGGTGTTCGCGCTGGACATCCTGCCGATGCAGAGCATCGCCGGGGTGGATTTCCTGCAGGGCGACTTCCGCGAGGAGAGCGTGCTGCGCGAGCTGGAGTCGCGCCTGGAAGGGCTGCGGGTGGATCTTGTGCTGTGCGATATGGCCCCCAATATGAGTGGTGTGGCGCTGGCCGACCAGATTCGCGCGATGGGTCTGGCCGAACTGGCGCTGGATTTCAGTCGGCAGTGGCTCAAGCCGGGCGGCTCGTTCCTGATCAAATTGTTCCAGGGAGTCGGTTTTGACGATTACTTGCGCAGCTTGCGTGCGGACTTCACCCGCGTAACCATGCGTAAACCCAAGGCCTCACGCGCGCGTTCGCGTGAGGTATACGCGCTGGCGGTAGGCTTCAGGCCAACCGCGGCGCATCCGGCGAGAACCGTGCATGAATGA
PROTEIN sequence
Length: 218
MARSKSSAVWLREHFNDEYVKKAQAEGLRSRAVYKLEELIERDRLLKPGINVVDLGAAPGSWSQLVRNRLGDSGKVFALDILPMQSIAGVDFLQGDFREESVLRELESRLEGLRVDLVLCDMAPNMSGVALADQIRAMGLAELALDFSRQWLKPGGSFLIKLFQGVGFDDYLRSLRADFTRVTMRKPKASRARSREVYALAVGFRPTAAHPARTVHE*