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scnpilot_solids2_trim150_scaffold_991_14

Organism: SCNPILOT_SOLID2_TRIM150_Plasmid_13

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 10241..12199

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa X13273 RepID=U8YYP9_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 652.0
  • Bit_score: 1189
  • Evalue 0.0
  • rbh
Type VI secretion protein {ECO:0000313|EMBL:KGE69533.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 652.0
  • Bit_score: 1189
  • Evalue 0.0
type IV secretory pathway VirD2 component similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 652.0
  • Bit_score: 1176
  • Evalue 0.0
  • rbh

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1959
ATGAGCCAGCGCGGCGATGACCGATTCCGCGTCCGGCCTGGCGCTCCGAAACAGCACGGCGATGCCTTCGTCAACAAGGTGCTGTGGCAGGCCAACAAGGCCGGCGCGAAGCTCGGCAAGGCGGCGGGCAAGGTCGGCCAGCGGCCTGGTTCCCGGCTGGGACGCGGCCACGTTGCGGCACGCTTCGCAGGCCGAGGACTTGGGGCCAACGCCCGGCGCGTAACAATCAAGGCTCGGCTGGTGAATCTGGCGCAGGCCGGGCCGCGCTCGACCGCCGCGCACCTGCGCTACATCGAGCGTGAAGGCGTCGATCGCCAAGGCGGGGCAGGGCAGGCCTACGGGCCGACGACCGACGAGGCTGACACCAAAGCGTTCGAGGAACGCGGGCGCGAGGATCGACACCAGTTCCGGTTCATCGTCTCGCCGGAGGATGCCGAACAGCTCGACGACCTGCGCACCTACACCCGGCACCTGATGGCGCGCATGGAGGCCGACCTCGGGACGCAGCTGGAATGGGTGGCCGTCGATCACTGGAACACCGACAACCCGCACACGCACGTCGTCCTGCGCGGCAAGGACGACACCGGCAAAGACCTCATCATTTCCCGCGACTACATCGCCGAAGGGATGCGCCGGCGGGCATCGGAGCTGGCGACGCAATGGTTAGGGCCGCGTACAGAGCTGGAGATGCAGCGCGCCATGCAGCGCGAAGTCGATCAGGAGCGCTGGACGGGCCTAGATCGCACCTTGCAGCGCGAGGCTGGCGACGATGGCCTGGTGCGCATTGAACGCTTCGCCGAACCCCGGCTGCAACGCCAGCGGCAAGTGCTGATCGGCCGCCTGCAACATTTGCAGCGCATGGGCCTGGCGACCGAGCAGCAGCCCGGCGCGTGGGCCGTCCATGCCGACGCCGAATCGACTCTGCGGACGATGGGCGAACGCGGCGACATCATCCGCACGATGCAACGGGCCATGAGCGGCAGGCAACGCGAACTGGCCGTGTTTCAGCCCGGCGAAGATGGCCGCGCCGTCACCGGCCGCGTCGTCGGCAAAGGGCTGGCCGACGAACTGTACGACAAGGGCTATCTGATCGTCGATGGCACCGACGGCAAGGCGCACTACGTCGCGCTGCCGCCGCGTGCCGAGCTGGAGCAGTACCCGACCGGGGCCGTGGTGGAGGTGAAAGGCGCGGCCGACGTGCGCACCGCCGACCGCAACGTCGCCGCGCTGGCCGTCGATGGTGTGTACCGCACCGATCATCACCTTGCGCTCGCCCAAAGTCAGGCCACGCCTGACCGCGACCCGCGCGAGGTGGTGGCCGCCCATGTGCGCCGGCTCGAAGCCCTGCGCCGCGCCGGTATCGTGGAACGCGAGGCCGAAGGTGTCTGGCGCATTCCCGGCGACCTGGCCGAACGGGGCCGCCAGTACGACGCGCAGCGCCTCGGCGGCGGCGTGGCGGTGGAACTGAAATCGCACCTGCCGATTGAGCGGCAGGCCCGTGTGATCGGTGCCACCTGGCTCGACCAGCAGTTGATTGGCGGCGGCAAGGGGCTGGGCGACCTGGGCTTTGGTAGCGAGGTCAAGGATGCGCTACGCCAGCGTGCCGACTTCCTGGTCGAGCAGGGATTGGCCGAGCGTCGCGGGCAGCGCGTCGTCCTTGCGCGCAACCTGCTGGCGACGCTGCGCGGGCGCGAGCTGGCGCAGGCCGCCAAGGATATTGCCGCCGAAACCGGCCTGGAGCATCGCCCCGTGGCCGACGGGCGGCGCGCGGCCGGCATCTACCGGCGCAGCGTCATGCTCGCCAGCGGGCGCTACGCGATGCTCGACGACGGCATGGGCTTCTCGCTGGTGCCGTGGAAGCCGGTGATCGAACAGCGGCTGGGCCAACAGCTCGCCGCCAAGGTGCGCGGCGGCAGTGTGTCGTGGGAACTGGGGCGGCAGCGCGGGCCGTCGGTTTGA
PROTEIN sequence
Length: 653
MSQRGDDRFRVRPGAPKQHGDAFVNKVLWQANKAGAKLGKAAGKVGQRPGSRLGRGHVAARFAGRGLGANARRVTIKARLVNLAQAGPRSTAAHLRYIEREGVDRQGGAGQAYGPTTDEADTKAFEERGREDRHQFRFIVSPEDAEQLDDLRTYTRHLMARMEADLGTQLEWVAVDHWNTDNPHTHVVLRGKDDTGKDLIISRDYIAEGMRRRASELATQWLGPRTELEMQRAMQREVDQERWTGLDRTLQREAGDDGLVRIERFAEPRLQRQRQVLIGRLQHLQRMGLATEQQPGAWAVHADAESTLRTMGERGDIIRTMQRAMSGRQRELAVFQPGEDGRAVTGRVVGKGLADELYDKGYLIVDGTDGKAHYVALPPRAELEQYPTGAVVEVKGAADVRTADRNVAALAVDGVYRTDHHLALAQSQATPDRDPREVVAAHVRRLEALRRAGIVEREAEGVWRIPGDLAERGRQYDAQRLGGGVAVELKSHLPIERQARVIGATWLDQQLIGGGKGLGDLGFGSEVKDALRQRADFLVEQGLAERRGQRVVLARNLLATLRGRELAQAAKDIAAETGLEHRPVADGRRAAGIYRRSVMLASGRYAMLDDGMGFSLVPWKPVIEQRLGQQLAAKVRGGSVSWELGRQRGPSV*