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ACD12_151

Alias: ACD12_25096.8951.13

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_151_1

Not on your lists

comp(1..1311)
DNA (1311bp) protein (437aa)
coiled-coil (db=Coil db_id=coil from=304 to=325 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=221 to=243)
Uncharacterized protein {ECO:0000313|EMBL:EKE14858.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_151_2

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comp(1666..2217)
DNA (552bp) protein (184aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=67)
transmembrane_regions (db=TMHMM db_id=tmhmm from=72 to=94)
seg (db=Seg db_id=seg from=46 to=68)
Uncharacterized protein {ECO:0000313|EMBL:EKE14849.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_151_3

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2457..2732
DNA (276bp) protein (92aa)
hypothetical protein
GIY-YIG (db=HMMPfam db_id=PF01541 from=6 to=75 evalue=1.7e-12 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=4 to=76 evalue=1.1e-09 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
no description (db=HMMSmart db_id=SM00465 from=4 to=84 evalue=0.00016 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
ACD12_151_4

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comp(2718..3251)
DNA (534bp) protein (178aa)
seg (db=Seg db_id=seg from=128 to=136)
seg (db=Seg db_id=seg from=22 to=41)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Uncharacterized protein {ECO:0000313|EMBL:EKE14851.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_151_5

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comp(3235..4371)
DNA (1137bp) protein (379aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q660_9BACT (db=UNIREF evalue=2.0e-70 bit_score=270.0 identity=38.42 coverage=96.5699208443272)
seg (db=Seg db_id=seg from=62 to=79)
coiled-coil (db=Coil db_id=coil from=308 to=329 evalue=NA)
ACD12_151_6

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4592..5074
DNA (483bp) protein (161aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
transmembrane_regions (db=TMHMM db_id=tmhmm from=107 to=129)
transmembrane_regions (db=TMHMM db_id=tmhmm from=134 to=156)
ACD12_151_7

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5078..5332
DNA (255bp) protein (85aa)
endo/excinuclease amino domain-containing protein
GIY-YIG (db=HMMPfam db_id=PF01541 from=1 to=72 evalue=2.5e-15 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=1 to=73 evalue=5.1e-12 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
no description (db=HMMSmart db_id=SM00465 from=1 to=80 evalue=4.0e-05 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
ACD12_151_8

Not on your lists

5361..6209
DNA (849bp) protein (283aa)
iron permease
transmembrane_regions (db=TMHMM db_id=tmhmm from=6 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=244 to=266)
transmembrane_regions (db=TMHMM db_id=tmhmm from=188 to=210)
ACD12_151_9

Not on your lists

comp(6198..7562)
DNA (1365bp) protein (455aa)
aldehyde dehydrogenase
aldehyde dehydrogenase
Succinate-semialdehyde dehydrogenase n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YWJ8_9CYAN (db=UNIREF evalue=1.0e-125 bit_score=453.0 identity=52.56 coverage=98.4615384615385)
seg (db=Seg db_id=seg from=320 to=336)
glutamate or tyrosine breakdown Jill Banfield (11/15/12)
ACD12_151_10

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comp(7568..8371)
DNA (804bp) protein (268aa)
thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase
thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase
Thiamine pyrophosphate protein domain protein TPP-binding protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LXM0_HALO1 (db=UNIREF evalue=2.0e-82 bit_score=309.0 identity=57.2 coverage=98.134328358209)
seg (db=Seg db_id=seg from=167 to=179)
Displaying 10 items

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