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ACD12_210

Alias: ACD12_97635.37107.14

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_210_1

Not on your lists

comp(559..765)
DNA (207bp) protein (69aa)
559..765 - (rbs_motif=TATAAT rbs_spacer=14bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE13678.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_210_2

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comp(795..1583)
DNA (789bp) protein (263aa)
YceG family protein
Aminodeoxychorismate lyase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HUA2_9FIRM (db=UNIREF evalue=5.0e-42 bit_score=174.0 identity=36.33 coverage=98.0988593155894)
YceG (db=HMMPfam db_id=PF02618 from=2 to=260 evalue=8.0e-67 interpro_id=IPR003770 interpro_description=Uncharacterised protein family YceG-like)
TIGR00247: conserved hypothetical protein, (db=HMMTigr db_id=TIGR00247 from=1 to=262 evalue=9.0e-15 interpro_id=IPR003770 interpro_description=Uncharacterised protein family YceG-like)
ACD12_210_3

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comp(1868..3130)
DNA (1263bp) protein (421aa)
thymidine phosphorylase
THYMID_PHOSPHORYLASE (db=PatternScan db_id=PS00647 from=115 to=130 evalue=0.0 interpro_id=IPR017872 interpro_description=Pyrimidine-nucleoside phosphorylase, conserved site GO=Biological Process: pyrimidine base metabolic process (GO:0006206))
no description (db=Gene3D db_id=G3DSA:3.40.1030.10 from=71 to=359 evalue=4.6e-66 interpro_id=IPR000312 interpro_description=Glycosyl transferase, family 3 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757))
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain (db=superfamily db_id=SSF52418 from=72 to=339 evalue=4.6e-56 interpro_id=IPR000312 interpro_description=Glycosyl transferase, family 3 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757))
ACD12_210_4

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comp(3123..4751)
DNA (1629bp) protein (543aa)
putative peptidoglycan lipid II flippase MurJ
transmembrane_regions (db=TMHMM db_id=tmhmm from=489 to=511)
seg (db=Seg db_id=seg from=90 to=104)
seg (db=Seg db_id=seg from=137 to=147)
ACD12_210_5

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4815..5126
DNA (312bp) protein (104aa)
4815..5126 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE13662.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_210_6

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5242..5640
DNA (399bp) protein (133aa)
Protein MraZ
AbrB/MazE/MraZ-like (db=superfamily db_id=SSF89447 from=2 to=132 evalue=1.2e-28)
MRAZ_LACPL_Q88V75; (db=BlastProDom db_id=PD006745 from=2 to=132 evalue=6.0e-22 interpro_id=IPR003444 interpro_description=MraZ)
MraZ (db=HMMPfam db_id=PF02381 from=79 to=130 evalue=1.4e-12 interpro_id=IPR020603 interpro_description=MraZ domain)
ACD12_210_7

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5643..6506
DNA (864bp) protein (288aa)
mraW; S-adenosyl-L-methionine-dependent methyltransferase MraW
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PCA8_9SPHN (db=UNIREF evalue=2.0e-47 bit_score=192.0 identity=41.11 coverage=85.4166666666667)
S-adenosyl-L-methionine dependent methyltransferase, MraW type (db=HMMPIR db_id=PIRSF004486 from=1 to=280 evalue=2.5e-80 interpro_id=IPR002903 interpro_description=S-adenosyl-L-methionine-dependent methyltransferase, MraW GO=Molecular Function: methyltransferase activity (GO:0008168))
Methyltransf_5 (db=HMMPfam db_id=PF01795 from=2 to=248 evalue=2.2e-70 interpro_id=IPR002903 interpro_description=S-adenosyl-L-methionine-dependent methyltransferase, MraW GO=Molecular Function: methyltransferase activity (GO:0008168))
ACD12_210_8

Not on your lists

6523..6795
DNA (273bp) protein (91aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
coiled-coil (db=Coil db_id=coil from=34 to=55 evalue=NA)
DivIC (db=HMMPfam db_id=PF04977 from=30 to=76 evalue=4.3e-06 interpro_id=IPR007060 interpro_description=Septum formation initiator GO=Biological Process: cell cycle (GO:0007049))
Uncharacterized protein {ECO:0000313|EMBL:EKE13665.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_210_9

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6799..8454
DNA (1656bp) protein (552aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCK5_THET1 (db=UNIREF evalue=4.0e-108 bit_score=395.0 identity=41.67 coverage=96.195652173913)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
ACD12_210_10

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8456..9544
DNA (1089bp) protein (363aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase)(Meso-diaminopimelate-adding enzyme) (Meso-A2pm-adding enzyme) (UDP-N-acetylmu
seg (db=Seg db_id=seg from=31 to=42)
seg (db=Seg db_id=seg from=142 to=153)
UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE (db=HMMPanther db_id=PTHR23135:SF4 from=32 to=360 evalue=2.5e-82)
ACD12_210_11

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9541..10278
DNA (738bp) protein (246aa)
hypothetical protein
Putative ABC transporter, permease protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPZ1_9FIRM (db=UNIREF evalue=1.0e-21 bit_score=107.0 identity=36.05 coverage=66.260162601626)
seg (db=Seg db_id=seg from=187 to=197)
seg (db=Seg db_id=seg from=217 to=233)
contains CxxC Jill Banfield (11/15/12)
ACD12_210_12

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10285..12573
DNA (2289bp) protein (763aa)
UDP-N-acetylmuramate--L-alanine ligase
UDP-N-acetylmuramate--L-alanine ligase n=8 Tax=Lactobacillus jensenii RepID=C2E2L9_9LACO (db=UNIREF evalue=3.0e-64 bit_score=250.0 identity=37.42 coverage=55.9633027522936)
seg (db=Seg db_id=seg from=85 to=96)
seg (db=Seg db_id=seg from=732 to=750)
ACD12_210_13

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12651..13976
DNA (1326bp) protein (442aa)
UDP-N-acetylglucosamine1-carboxyvinyltransferase
seg (db=Seg db_id=seg from=71 to=83)
seg (db=Seg db_id=seg from=395 to=408)
EPT/RTPC-like (db=superfamily db_id=SSF55205 from=2 to=441 evalue=1.5e-98 interpro_id=IPR013792 interpro_description=RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO=Molecular Function: catalytic activity (GO:0003824))
ACD12_210_14

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14315..15019
DNA (705bp) protein (235aa)
hypothetical protein
Transposase IS200-like (db=superfamily db_id=SSF143422 from=3 to=162 evalue=2.2e-13)
Transposase_17 (db=HMMPfam db_id=PF01797 from=82 to=158 evalue=1.5e-06 interpro_id=IPR002686 interpro_description=Transposase IS200-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
hypothetical protein alias=ACD12_C00210G00014,ACD12_97635.37107.14G0014,ACD12_97635.37107.14_14 id=5128 tax=ACD12 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=
ACD12_210_15

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15102..16373
DNA (1272bp) protein (424aa)
Sugar-phosphate nucleotydyltransferase
seg (db=Seg db_id=seg from=147 to=162)
Trimeric LpxA-like enzymes (db=superfamily db_id=SSF51161 from=225 to=413 evalue=4.3e-31 interpro_id=IPR011004 interpro_description=Trimeric LpxA-like GO=Molecular Function: transferase activity (GO:0016740))
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=4 to=301 evalue=1.4e-29)
ACD12_210_16

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16370..17335
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVD4_9BACT (db=UNIREF evalue=6.0e-80 bit_score=301.0 identity=49.19 coverage=94.4099378881988)
hypothetical protein
seg (db=Seg db_id=seg from=283 to=294)
ACD12_210_17

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17347..17706
DNA (360bp) protein (120aa)
diacylglycerol kinase
Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5L8_9FIRM (db=UNIREF evalue=2.0e-12 bit_score=74.3 identity=38.53 coverage=90.0)
transmembrane_regions (db=TMHMM db_id=tmhmm from=91 to=113)
transmembrane_regions (db=TMHMM db_id=tmhmm from=48 to=70)
ACD12_210_18

Not on your lists

17743..18780
DNA (1038bp) protein (346aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=93 to=115)
transmembrane_regions (db=TMHMM db_id=tmhmm from=139 to=157)
ACD12_210_19

Not on your lists

comp(18799..19047)
DNA (249bp) protein (83aa)
18799..19047 - (rbs_motif=TATA rbs_spacer=6bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE13676.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_210_20

Not on your lists

comp(19584..19712)
DNA (129bp) protein (43aa)
seg (db=Seg db_id=seg from=15 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKE13677.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_210_21

Not on your lists

20116..20334
DNA (219bp) protein (73aa)
stage V sporulation protein E
Stage V sporulation protein E n=1 Tax=Filifactor alocis ATCC 35896 RepID=D6GRV1_9FIRM (db=UNIREF evalue=5.0e-12 bit_score=73.2 identity=48.0 coverage=97.2602739726027)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
ACD12_210_22

Not on your lists

20481..21581
DNA (1101bp) protein (367aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=70 to=92)
transmembrane_regions (db=TMHMM db_id=tmhmm from=99 to=118)
seg (db=Seg db_id=seg from=138 to=149)
ACD12_210_23

Not on your lists

21544..22269
DNA (726bp) protein (242aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
seg (db=Seg db_id=seg from=6 to=46)
POTRA_1 (db=HMMPfam db_id=PF08478 from=61 to=101 evalue=6.5e-05 interpro_id=IPR013685 interpro_description=Polypeptide-transport-associated, FtsQ-type)
Uncharacterized protein {ECO:0000313|EMBL:EKE13657.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_210_24

Not on your lists

22375..23652
DNA (1278bp) protein (426aa)
cell division protein FtsA
cell division protein FtsA
Cell division protein FtsA n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWJ9_HALOH (db=UNIREF evalue=4.0e-86 bit_score=322.0 identity=44.29 coverage=97.1830985915493)
seg (db=Seg db_id=seg from=308 to=321)
ACD12_210_25

Not on your lists

23654..24775
DNA (1122bp) protein (374aa)
ftsZ; cell division protein FtsZ
ftsZ; cell division protein FtsZ
Cell division protein ftsZ n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFT2_9FIRM (db=UNIREF evalue=5.0e-96 bit_score=354.0 identity=61.69 coverage=81.8181818181818)
seg (db=Seg db_id=seg from=16 to=23)
ACD12_210_26
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

24899..27211
DNA (2313bp) protein (771aa)
isoleucyl-tRNA synthetase
isoleucyl-tRNA synthetase
Isoleucyl-tRNA synthetase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C715_SPHTD (db=UNIREF evalue=0.0 bit_score=801.0 identity=50.78 coverage=91.1802853437095)
ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES (db=HMMPanther db_id=PTHR11946 from=9 to=764 evalue=1.6e-117)
ACD12_210_27

Not on your lists

27430..27939
DNA (510bp) protein (170aa)
Isoleucyl-tRNA synthetase n=1 Tax=uncultured euryarchaeote Alv-FOS5 RepID=Q3SB97_9EURY (db=UNIREF evalue=4.0e-11 bit_score=70.5 identity=34.01 coverage=80.5882352941177)
coiled-coil (db=Coil db_id=coil from=23 to=44 evalue=NA)
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases (db=superfamily db_id=SSF47323 from=4 to=96 evalue=2.0e-07 interpro_id=IPR009080 interpro_description=Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: t
Isoleucyl-tRNA synthetase {ECO:0000313|EMBL:EKE13649.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_210_28

Not on your lists

27942..28970
DNA (1029bp) protein (343aa)
cell cycle protein
Rod shape-determining protein RodA n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L470_9BACT (db=UNIREF evalue=2.0e-42 bit_score=176.0 identity=39.59 coverage=82.798833819242)
transmembrane_regions (db=TMHMM db_id=tmhmm from=319 to=341)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=43)
ACD12_210_29

Not on your lists


29027..29338
DNA (312bp) protein (104aa)
50S ribosomal protein L21
Ribosomal_L21p (db=HMMPfam db_id=PF00829 from=3 to=98 evalue=3.9e-23 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L21p-like (db=superfamily db_id=SSF141091 from=3 to=103 evalue=5.4e-22)
L21: ribosomal protein L21 (db=HMMTigr db_id=TIGR00061 from=4 to=103 evalue=1.9e-15 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD12_210_30

Not on your lists


29340..29585
DNA (246bp) protein (82aa)
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1D9_9PROT (db=UNIREF evalue=4.0e-17 bit_score=90.1 identity=53.09 coverage=97.5609756097561)
RIBOSOMAL_L27 (db=PatternScan db_id=PS00831 from=34 to=48 evalue=0.0 interpro_id=IPR018261 interpro_description=Ribosomal protein L27, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L27 (db=HMMPfam db_id=PF01016 from=2 to=80 evalue=2.6e-27 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Displaying items 1-30 of 39 in total

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