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ACD12_288

Alias: ACD12_114298.2467.5

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_288_1
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

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2..451
DNA (450bp) protein (150aa)
RNA-metabolising metallo-beta-lactamase
Beta-Casp (db=HMMPfam db_id=PF10996 from=3 to=65 evalue=1.8e-19 interpro_id=IPR022712 interpro_description=Beta-Casp domain)
CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR (db=HMMPanther db_id=PTHR11203 from=13 to=133 evalue=8.3e-19)
CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR, 73 KDA SUBUNIT (db=HMMPanther db_id=PTHR11203:SF11 from=13 to=133 evalue=8.3e-19)
ACD12_288_2

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502..618
DNA (117bp) protein (39aa)
502..618 + (rbs_motif=ATAA rbs_spacer=3bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE15358.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_288_3
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

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comp(615..1001)
DNA (387bp) protein (129aa)
restriction endonuclease
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=9 to=128 evalue=2.8e-13 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like GO=Molecular Function: DNA binding (GO:0003677))
Mrr_cat (db=HMMPfam db_id=PF04471 from=17 to=117 evalue=3.3e-13 interpro_id=IPR007560 interpro_description=Restriction endonuclease, type IV-like, Mrr GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: endonuclease activity (GO:0004519), Biological Process: DNA restriction-modification system (GO:0009307))
restriction endonuclease-like; K07448 restriction system protein alias=ACD12_C00288G00003,ACD12_114298.2467.5G0003,ACD12_114298.2467.5_3 id=5606 tax=ACD12 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=
ACD12_288_4
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

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comp(1679..1906)
DNA (228bp) protein (76aa)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=36 to=75 evalue=7.0e-12)
DNA_methylase (db=HMMPfam db_id=PF00145 from=38 to=74 evalue=8.2e-11 interpro_id=IPR001525 interpro_description=DNA methylase, C-5 cytosine-specific GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA methylation (GO:0006306))
CYTOSINE-SPECIFIC METHYLTRANSFERASE (db=HMMPanther db_id=PTHR10629:SF11 from=42 to=75 evalue=1.8e-09)
MODIFICATION METHYLASE (db=HMMPanther db_id=PTHR10629 from=42 to=75 evalue=1.8e-09 interpro_id=IPR001525 interpro_description=DNA methylase, C-5 cytosine-specific GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA methylation (GO:0006306))
ACD12_288_5
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

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comp(1924..2499)
DNA (576bp) protein (192aa)
1924..2499 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=GWA2_Berkelbacteria_35_9
Displaying 5 items

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