ggKbase home page

ACD12_339

Alias: ACD12_224714.3479.5

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_339_1

Not on your lists

3..728
DNA (726bp) protein (242aa)
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=2 Tax=Thermoanaerobacteraceae RepID=B7R9C6_9THEO (db=UNIREF evalue=8.0e-35 bit_score=150.0 identity=33.2 coverage=98.7603305785124)
UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMYL-2,6-DIAMINOPIMELATE--D-ALANYL-D- ALANYL LIGASE (db=HMMPanther db_id=PTHR23135:SF3 from=1 to=232 evalue=8.7e-21 interpro_id=IPR005863 interpro_description=UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: regulation of cell shape (GO:0008360), Molecular Function: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activi
MUR LIGASE FAMILY MEMBER (db=HMMPanther db_id=PTHR23135 from=1 to=232 evalue=8.7e-21)
ACD12_339_2

Not on your lists

737..1900
DNA (1164bp) protein (388aa)
DdlA2; D-alanine--D-alanine ligase
DALA_DALA_LIGASE_2 (db=PatternScan db_id=PS00844 from=301 to=330 evalue=0.0 interpro_id=IPR000291 interpro_description=D-alanine--D-alanine ligase/VANA/B/C, conserved site GO=Molecular Function: D-alanine-D-alanine ligase activity (GO:0008716), Biological Process: peptidoglycan biosynthetic process (GO:0009252))
DALA_DALA_LIGASE_1 (db=PatternScan db_id=PS00843 from=105 to=116 evalue=0.0 interpro_id=IPR000291 interpro_description=D-alanine--D-alanine ligase/VANA/B/C, conserved site GO=Molecular Function: D-alanine-D-alanine ligase activity (GO:0008716), Biological Process: peptidoglycan biosynthetic process (GO:0009252))
D_ala_D_alaTIGR: D-alanine--D-alanine (db=HMMTigr db_id=TIGR01205 from=3 to=356 evalue=1.7e-99 interpro_id=IPR005905 interpro_description=D-alanine--D-alanine ligase GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: D-alanine-D-alanine ligase activity (GO:0008716), Biological Process: peptidoglycan biosynthetic process (GO:0009252))
ACD12_339_3

Not on your lists

comp(1904..2290)
DNA (387bp) protein (129aa)
multidrug ABC transporter permease
Putative ABC-2 transporter n=2 Tax=Leptospirillum sp. Group II RepID=A3EVL9_9BACT (db=UNIREF evalue=3.0e-11 bit_score=70.9 identity=45.95 coverage=56.5891472868217)
transmembrane_regions (db=TMHMM db_id=tmhmm from=92 to=114)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
ACD12_339_4

Not on your lists

comp(2715..3308)
DNA (594bp) protein (198aa)
ABC-type multidrug transport system, ATPase component
seg (db=Seg db_id=seg from=44 to=57)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=1 to=112 evalue=4.4e-24)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=146 evalue=2.4e-21)
Displaying 4 items

View Taxonomy