Alias: ACD37_105231.17474.10
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD37_129_1
uncultured bacterium, Bacteria
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Not on your lists |
63..1097
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hypothetical protein
hypothetical protein
Phenylalanyl-tRNA synthetase alpha chain (Phenylalanine--tRNA ligase alpha chain) n=1 Tax=NC10 bacterium 'Dutch sediment' RepID=D5MGN0_9BACT (db=UNIREF evalue=3.0e-89 bit_score=332.0 identity=49.71 coverage=99.4202898550725)
no description (db=Gene3D db_id=G3DSA:3.30.930.10 from=8 to=344 evalue=1.8e-98)
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ACD37_129_2
R_OP11_Levybacteria_37_11, Levybacteria, Microgenomates, Bacteria
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Not on your lists |
1097..3037
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hypothetical protein
pheT_bact: phenylalanyl-tRNA synthetase, be (db=HMMTigr db_id=TIGR00472 from=3 to=645 evalue=1.5e-76 interpro_id=IPR004532 interpro_description=Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: phenylalanine-tRNA ligase activity (GO:0004826), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: phenylalanyl-tRNA a
PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (db=HMMPanther db_id=PTHR10947 from=40 to=646 evalue=9.9e-49)
PheT/TilS domain (db=superfamily db_id=SSF56037 from=85 to=290 evalue=7.1e-47 interpro_id=IPR020825 interpro_description=Phenylalanyl-tRNA synthetase, B3/B4)
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ACD37_129_3
uncultured bacterium, Bacteria
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Not on your lists |
3326..3952
|
seg (db=Seg db_id=seg from=95 to=106)
seg (db=Seg db_id=seg from=117 to=133)
Uncharacterized protein {ECO:0000313|EMBL:EKD87141.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD37_129_4
Microgenomates bacterium GW2011_GWC1_38_14, Microgenomates, Bacteria
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Not on your lists |
5429..6607
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hypothetical protein
seg (db=Seg db_id=seg from=323 to=336)
seg (db=Seg db_id=seg from=301 to=310)
seg (db=Seg db_id=seg from=18 to=31)
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ACD37_129_5
R_OP11_Levybacteria_37_11, Levybacteria, Microgenomates, Bacteria
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Not on your lists |
6720..8732
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hypothetical protein
hypothetical protein
ATP-dependent DNA helicase RecG n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCP1_THET1 (db=UNIREF evalue=6.0e-153 bit_score=545.0 identity=44.33 coverage=98.3606557377049)
seg (db=Seg db_id=seg from=416 to=428)
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ACD37_129_6
GWA2_OP11_var_36_13, Levybacteria, Microgenomates, Bacteria
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Not on your lists |
8773..8997
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seg (db=Seg db_id=seg from=6 to=18)
Ribosomal_L32p (db=HMMPfam db_id=PF01783 from=5 to=56 evalue=2.6e-21 interpro_id=IPR002677 interpro_description=Ribosomal protein L32p GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
rpmF_bact: ribosomal protein L32 (db=HMMTigr db_id=TIGR01031 from=5 to=57 evalue=9.7e-21 interpro_id=IPR002677 interpro_description=Ribosomal protein L32p GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
Zn-binding ribosomal proteins (db=superfamily db_id=SSF57829 from=3 to=58 evalue=1.0e-18 interpro_id=IPR011332 interpro_description=Ribosomal protein, zinc-binding domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD37_129_7
GWB1_OP11_36_18_partial, Levybacteria, Microgenomates, Bacteria
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Not on your lists |
8994..9353
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hypothetical protein
NusB (db=HMMPfam db_id=PF01029 from=22 to=113 evalue=1.4e-27 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
NusB-like (db=superfamily db_id=SSF48013 from=7 to=113 evalue=1.1e-26 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
nusB: transcription antitermination factor N (db=HMMTigr db_id=TIGR01951 from=7 to=116 evalue=2.9e-26 interpro_id=IPR011605 interpro_description=NusB antitermination factor GO=Molecular Function: transcription termination factor activity (GO:0003715), Biological Process: transcription termination (GO:0006353))
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ACD37_129_8
uncultured bacterium, Bacteria
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Not on your lists |
9310..9999
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rnc; ribonuclease III (EC:3.1.26.3)
seg (db=Seg db_id=seg from=137 to=146)
RNASE_3_1 (db=PatternScan db_id=PS00517 from=43 to=51 evalue=0.0 interpro_id=IPR000999 interpro_description=Ribonuclease III GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease III activity (GO:0004525), Biological Process: RNA processing (GO:0006396))
RNaseIII: ribonuclease III (db=HMMTigr db_id=TIGR02191 from=9 to=227 evalue=7.8e-92 interpro_id=IPR011907 interpro_description=Ribonuclease III, bacterial GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease III activity (GO:0004525), Biological Process: rRNA catabolic process (GO:0016075))
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ACD37_129_9
GWA2_OP11_var_36_13, Levybacteria, Microgenomates, Bacteria
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Not on your lists |
10018..10245
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rpsP; 30S ribosomal protein S16
RIBOSOMAL_S16 (db=PatternScan db_id=PS00732 from=3 to=12 evalue=0.0 interpro_id=IPR020592 interpro_description=Ribosomal protein S16, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
S16: ribosomal protein S16 (db=HMMTigr db_id=TIGR00002 from=3 to=75 evalue=7.9e-18 interpro_id=IPR000307 interpro_description=Ribosomal protein S16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S16 (db=HMMPanther db_id=PTHR12919 from=2 to=75 evalue=1.8e-17 interpro_id=IPR000307 interpro_description=Ribosomal protein S16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD37_129_10
GWA2_OP11_var_36_13, Levybacteria, Microgenomates, Bacteria
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Not on your lists |
10242..10484
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putative RNA-binding protein (contains KH domain)
Prokaryotic type KH domain (KH-domain type II) (db=superfamily db_id=SSF54814 from=2 to=61 evalue=1.3e-06 interpro_id=IPR009019 interpro_description=K Homology, prokaryotic type GO=Molecular Function: RNA binding (GO:0003723))
KH_1 (db=HMMPfam db_id=PF00013 from=33 to=59 evalue=7.7e-06 interpro_id=IPR018111 interpro_description=K Homology, type 1, subgroup GO=Molecular Function: RNA binding (GO:0003723))
KH_TYPE_1 (db=ProfileScan db_id=PS50084 from=29 to=80 evalue=8.995 interpro_id=IPR004088 interpro_description=K Homology, type 1 GO=Molecular Function: RNA binding (GO:0003723))
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ACD37_129_11
GWB1_OP11_36_18_partial, Levybacteria, Microgenomates, Bacteria
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Not on your lists |
10485..11180
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tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
seg (db=Seg db_id=seg from=118 to=130)
coiled-coil (db=Coil db_id=coil from=67 to=88 evalue=NA)
tRNA-(m1G37) methyltransferase (db=HMMPIR db_id=PIRSF000386 from=1 to=231 evalue=2.4e-114 interpro_id=IPR002649 interpro_description=tRNA (guanine-N1-)-methyltransferase, bacteria GO=Molecular Function: RNA binding (GO:0003723), Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA (guanine-N1-)-methyltransferase activity (GO:0009019))
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ACD37_129_12
GWA2_OP11_var_36_13, Levybacteria, Microgenomates, Bacteria
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Not on your lists |
comp(11158..11889)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
seg (db=Seg db_id=seg from=221 to=243)
seg (db=Seg db_id=seg from=98 to=112)
coiled-coil (db=Coil db_id=coil from=47 to=75 evalue=NA)
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ACD37_129_13
RBG_16_OP11_Levybacteria_35_6_curated, Levybacteria, Microgenomates, Bacteria
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Not on your lists |
comp(11873..12418)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
transmembrane_regions 21..43 Tax=RBG_16_OP11_Levybacteria_35_6_curated
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ACD37_129_14
uncultured bacterium, Bacteria
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Not on your lists |
comp(12411..13457)
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hypothetical protein
Tfp pilus assembly protein, ATPase PilM (db=HMMPIR db_id=PIRSF019169 from=2 to=348 evalue=1.6e-63 interpro_id=IPR005883 interpro_description=Type IV pilus assembly protein PilM)
pilM: type IV pilus assembly protein PilM (db=HMMTigr db_id=TIGR01175 from=1 to=347 evalue=6.3e-53 interpro_id=IPR005883 interpro_description=Type IV pilus assembly protein PilM)
Actin-like ATPase domain (db=superfamily db_id=SSF53067 from=178 to=345 evalue=2.3e-19)
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ACD37_129_15
GWA2_OP11_var_36_13, Levybacteria, Microgenomates, Bacteria
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Not on your lists |
comp(13459..13611)
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13459..13611 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKP95260.1}; TaxID=1618456 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA2_36_13.;"
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ACD37_129_16
uncultured bacterium, Bacteria
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Not on your lists |
14090..14392
|
seg (db=Seg db_id=seg from=9 to=21)
seg (db=Seg db_id=seg from=72 to=90)
Uncharacterized protein {ECO:0000313|EMBL:EKD87137.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD37_129_17
GWB1_OP11_36_18_partial, Levybacteria, Microgenomates, Bacteria
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Not on your lists |
comp(14431..15036)
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seg (db=Seg db_id=seg from=182 to=189)
transmembrane_regions (db=TMHMM db_id=tmhmm from=23 to=45)
seg (db=Seg db_id=seg from=102 to=110)
seg (db=Seg db_id=seg from=22 to=40)
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ACD37_129_18
GWB1_OP11_36_18_partial, Levybacteria, Microgenomates, Bacteria
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Not on your lists |
comp(15033..15506)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
Uncharacterized protein {ECO:0000313|EMBL:KKQ00525.1}; TaxID=1618462 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_36_18.;"
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ACD37_129_19
GWB1_OP11_36_18_partial, Levybacteria, Microgenomates, Bacteria
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Not on your lists |
comp(15496..15984)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=24)
seg (db=Seg db_id=seg from=6 to=18)
Pilin assembly protein {ECO:0000313|EMBL:KKQ00524.1}; TaxID=1618462 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_36_18.;"
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ACD37_129_20
uncultured bacterium, Bacteria
|
Not on your lists |
16127..16246
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16127..16246 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD87136.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD37_129_21
uncultured bacterium, Bacteria
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Not on your lists |
17319..17429
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seg (db=Seg db_id=seg from=2 to=36)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
Uncharacterized protein {ECO:0000313|EMBL:EKD87135.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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