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ACD37_315

Alias: ACD37p_295435.12325.7

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD37_315_1
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

372..1055
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9XFI6_STRVR (db=UNIREF evalue=3.0e-15 bit_score=85.5 identity=30.39 coverage=84.6491228070175)
hypothetical protein (db=KEGG evalue=5.0e-12 bit_score=74.7 identity=28.29 coverage=85.5263157894737)
coiled-coil (db=Coil db_id=coil from=64 to=85 evalue=NA)
seg (db=Seg db_id=seg from=5 to=18)
ACD37_315_2

Not on your lists

1213..2040
DNA (828bp) protein (276aa)
Glutamate racemase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TEK3_9CHLR (db=UNIREF evalue=2.0e-53 bit_score=213.0 identity=41.29 coverage=92.7536231884058)
glutamate racemase
GLUTAMATE RACEMASE (db=HMMPanther db_id=PTHR21198 from=7 to=272 evalue=9.0e-72)
glut_race: glutamate racemase (db=HMMTigr db_id=TIGR00067 from=11 to=259 evalue=5.7e-67 interpro_id=IPR004391 interpro_description=Glutamate racemase GO=Molecular Function: glutamate racemase activity (GO:0008881), Biological Process: peptidoglycan biosynthetic process (GO:0009252))
ACD37_315_3
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

2167..2997
DNA (831bp) protein (277aa)
seg (db=Seg db_id=seg from=262 to=271)
seg (db=Seg db_id=seg from=8 to=23)
TAT_signal_seq: Tat (twin-arginine tra (db=HMMTigr db_id=TIGR01409 from=1 to=36 evalue=0.036 interpro_id=IPR019546 interpro_description=Twin-arginine translocation pathway, signal sequence, bacterial/archaeal)
seg 262..271 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD37_315_4
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

2990..3631
DNA (642bp) protein (214aa)
2990..3631 + ( gc_cont=0.379)
seg 262..271 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD37_315_5

Not on your lists

3634..5115
DNA (1482bp) protein (494aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
seg (db=Seg db_id=seg from=133 to=145)
seg (db=Seg db_id=seg from=401 to=413)
seg (db=Seg db_id=seg from=363 to=374)
ACD37_315_6
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

5171..6100
DNA (930bp) protein (310aa)
seg (db=Seg db_id=seg from=44 to=58)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=33 evalue=7.0)
seg 44..58 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD37_315_7

Not on your lists

6594..6926
DNA (333bp) protein (111aa)
6594..6926 + ( gc_cont=0.378)
Uncharacterized protein {ECO:0000313|EMBL:EKD85612.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD37_315_8
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

6933..7241
DNA (309bp) protein (103aa)
6933..7241 + ( gc_cont=0.330)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD37_315_9
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

7447..8949
DNA (1503bp) protein (501aa)
indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
seg (db=Seg db_id=seg from=373 to=387)
seg (db=Seg db_id=seg from=341 to=356)
seg (db=Seg db_id=seg from=240 to=257)
ACD37_315_10
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

8954..9778
DNA (825bp) protein (275aa)
seg (db=Seg db_id=seg from=185 to=196)
HAD-like (db=superfamily db_id=SSF56784 from=28 to=236 evalue=2.6e-17 interpro_id=IPR023214 interpro_description=HAD-like domain)
seg 185..196 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD37_315_11
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

10815..11033
DNA (219bp) protein (73aa)
Tryptophan synthase beta chain 1 n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4H0_MAGSM (db=UNIREF evalue=2.0e-15 bit_score=84.7 identity=59.7 coverage=84.9315068493151)
tryptophan synthase beta chain (EC:4.2.1.20)
SER/THR DEHYDRATASE, TRP SYNTHASE (db=HMMPanther db_id=PTHR10314 from=1 to=66 evalue=2.8e-20)
TRYPTOPHAN SYNTHASE BETA CHAIN (db=HMMPanther db_id=PTHR10314:SF3 from=1 to=66 evalue=2.8e-20)
ACD37_315_12
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

11017..11811
DNA (795bp) protein (265aa)
tryptophan synthase, alpha chain (EC:4.2.1.20)
TRP_SYNTHASE_ALPHA (db=PatternScan db_id=PS00167 from=48 to=61 evalue=0.0 interpro_id=IPR018204 interpro_description=Tryptophan synthase, alpha chain, active site GO=Molecular Function: tryptophan synthase activity (GO:0004834))
Ribulose-phoshate binding barrel (db=superfamily db_id=SSF51366 from=1 to=263 evalue=2.8e-77 interpro_id=IPR011060 interpro_description=Ribulose-phosphate binding barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
(db=HMMPfam db_id=PF00290 from=8 to=259 evalue=1.0e-76 interpro_id=IPR002028 interpro_description=Tryptophan synthase, alpha chain GO=Molecular Function: tryptophan synthase activity (GO:0004834), Biological Process: tryptophan metabolic process (GO:0006568))
ACD37_315_13
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

11824..12357
DNA (534bp) protein (178aa)
Tryptophanyl-tRNA synthetase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=E4M4M2_9FIRM (db=UNIREF evalue=3.0e-58 bit_score=227.0 identity=58.29 coverage=97.1910112359551)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
transmembrane_regions (db=TMHMM db_id=tmhmm from=119 to=138)
TRYPTOPHANYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR10055 from=8 to=177 evalue=8.9e-66 interpro_id=IPR002306 interpro_description=Tryptophanyl-tRNA synthetase GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: tryptophan-tRNA ligase activity (GO:0004830), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: tryptophanyl-tRNA aminoacylation (GO:0006436))
Displaying 13 items

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