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64_003_scaffold_77

Search features with annotation key words

Displaying items 61-90 of 190 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_003_scaffold_77_61
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(60371..61540)
-----------------
DNA (1170bp)
protein (390aa)
Protein ynjB n=2 Tax=Citrobacter RepID=R8UTX3_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC12581.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein; K05777 putative thiamine transport system substrate-binding protein
64_003_scaffold_77_62
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61572..62270)
-----------------
DNA (699bp)
protein (233aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CMR9_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL82354.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
64_003_scaffold_77_63
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62267..62827)
-----------------
DNA (561bp)
protein (187aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QXU3_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL82353.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
64_003_scaffold_77_64
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63147..64028)
-----------------
DNA (882bp)
protein (294aa)
exodeoxyribonuclease III; K01142 exodeoxyribonuclease III [EC:3.1.11.2]
Exonuclease III n=6 Tax=Citrobacter RepID=J1G7T3_9ENTR
Exodeoxyribonuclease III {ECO:0000313|EMBL:ETX70640.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
64_003_scaffold_77_65
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64398..65618
-----------------
DNA (1221bp)
protein (407aa)
Succinylornithine transaminase {ECO:0000256|HAMAP-Rule:MF_01173}; EC=2.6.1.81 {ECO:0000256|HAMAP-Rule:MF_01173};; Succinylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01173}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
bifunctional succinylornithine transaminase/acetylornithine transaminase; K00840 succinylornithine aminotransferase [EC:2.6.1.81]
Succinylornithine transaminase n=3 Tax=Citrobacter RepID=K8QUA5_CITFR
64_003_scaffold_77_66
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65615..66649
-----------------
DNA (1035bp)
protein (345aa)
Arginine N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_01171, ECO:0000256|SAAS:SAAS00075375}; Short=AST {ECO:0000256|HAMAP-Rule:MF_01171};; EC=2.3.1.109 {ECO:0000256|HAMAP-Rule:MF_01171, ECO:0000256|SAAS:SAAS00075375};; AOST {ECO:0000256|HAMAP-Rule:MF_01171}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
astA; arginine succinyltransferase (EC:2.3.1.109); K00673 arginine N-succinyltransferase [EC:2.3.1.109]
Arginine N-succinyltransferase n=6 Tax=Citrobacter RepID=J1G830_9ENTR
64_003_scaffold_77_67
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66646..68124
-----------------
DNA (1479bp)
protein (493aa)
N-succinylglutamate 5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01174}; EC=1.2.1.71 {ECO:0000256|HAMAP-Rule:MF_01174};; Succinylglutamic semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01174}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein; K06447 succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
N-succinylglutamate 5-semialdehyde dehydrogenase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CMS3_CITFR
64_003_scaffold_77_68
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68121..69464
-----------------
DNA (1344bp)
protein (448aa)
N-succinylarginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_01172, ECO:0000256|SAAS:SAAS00074425}; EC=3.5.3.23 {ECO:0000256|HAMAP-Rule:MF_01172, ECO:0000256|SAAS:SAAS00074418};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
succinylarginine dihydrolase; K01484 succinylarginine dihydrolase [EC:3.5.3.23]
N-succinylarginine dihydrolase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QXU8_CITFR
64_003_scaffold_77_69
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69457..70422
-----------------
DNA (966bp)
protein (322aa)
Succinylglutamate desuccinylase {ECO:0000256|HAMAP-Rule:MF_00767, ECO:0000256|SAAS:SAAS00036677}; EC=3.5.1.96 {ECO:0000256|HAMAP-Rule:MF_00767, ECO:0000256|SAAS:SAAS00036667};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
succinylglutamate desuccinylase; K05526 succinylglutamate desuccinylase [EC:3.5.1.96]
Succinylglutamate desuccinylase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3D6G4_CITFR
64_003_scaffold_77_70
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70772..71257
-----------------
DNA (486bp)
protein (162aa)
Spheroplast protein Y n=7 Tax=Citrobacter RepID=J0M418_9ENTR
Spheroplast protein Y {ECO:0000313|EMBL:ETX70646.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
spy; periplasmic protein
64_003_scaffold_77_71
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71611..72186
-----------------
DNA (576bp)
protein (192aa)
Protein Ves n=5 Tax=Citrobacter RepID=J1G834_9ENTR
Protein Ves {ECO:0000256|HAMAP-Rule:MF_01591}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein; K09975 hypothetical protein
64_003_scaffold_77_72
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72146..73033)
-----------------
DNA (888bp)
protein (296aa)
cho; excinuclease Cho (EC:3.1.25.-); K05984 excinuclease Cho [EC:3.1.25.-]
Nucleotide excision repair endonuclease n=4 Tax=Citrobacter RepID=J0VWP9_9ENTR
Excinuclease cho {ECO:0000313|EMBL:ETX70648.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
64_003_scaffold_77_73
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73165..73995)
-----------------
DNA (831bp)
protein (277aa)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
nadE; NAD synthetase; K01916 NAD+ synthase [EC:6.3.1.5]
NH(3)-dependent NAD(+) synthetase n=2 Tax=Citrobacter RepID=J0MAU1_9ENTR
64_003_scaffold_77_74
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74196..74537
-----------------
DNA (342bp)
protein (114aa)
Osmotically-inducible lipoprotein E n=12 Tax=Enterobacteriaceae RepID=C1M3T7_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:KJC09201.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
DNA-binding transcriptional activator OsmE
64_003_scaffold_77_75
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74836..75156
-----------------
DNA (321bp)
protein (107aa)
chbB; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB (EC:2.7.1.69); K02760 PTS system, cellobiose-specific IIB component [EC:2.7.1.69]
PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB n=3 Tax=Citrobacter RepID=K8QUB4_CITFR
PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB {ECO:0000313|EMBL:KJC09202.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
64_003_scaffold_77_76
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75244..76602
-----------------
DNA (1359bp)
protein (453aa)
chbC; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC (EC:2.7.1.69); K02761 PTS system, cellobiose-specific IIC component
N,N'-diacetylchitobiose permease IIC component n=9 Tax=Citrobacter RepID=C1M3U0_9ENTR
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
64_003_scaffold_77_77
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76657..77004
-----------------
DNA (348bp)
protein (116aa)
chbA; N,N'-diacetylchitobiose-specific PTS system, EIIA component (EC:2.7.1.-); K02759 PTS system, cellobiose-specific IIA component [EC:2.7.1.69]
PEP-dependent phosphotransferase enzyme III n=8 Tax=Citrobacter RepID=J1FXH8_9ENTR
PTS system N,N'-diacetylchitobiose-specific transporter subunit IIA {ECO:0000313|EMBL:KKC62456.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
64_003_scaffold_77_78
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77018..77857
-----------------
DNA (840bp)
protein (280aa)
HTH-type transcriptional regulator ChbR n=6 Tax=Citrobacter RepID=C1M3U2_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:KKC62455.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
DNA-binding transcriptional regulator ChbR; K03490 AraC family transcriptional regulator, cel operon repressor
64_003_scaffold_77_79
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77982..79337
-----------------
DNA (1356bp)
protein (452aa)
hypothetical protein; K01222 6-phospho-beta-glucosidase [EC:3.2.1.86]
6-phospho-beta-glucosidase n=3 Tax=Citrobacter RepID=J0LZM4_9ENTR
6-phospho-beta-glucosidase {ECO:0000313|EMBL:ETX70655.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
64_003_scaffold_77_80
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79350..80108
-----------------
DNA (759bp)
protein (253aa)
Chitooligosaccharide deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Short=COD {ECO:0000256|HAMAP-Rule:MF_01246};; EC=3.5.1.105 {ECO:0000256|HAMAP-Rule:MF_01246};; Chitin disaccharide deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitobiose deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitobiose-6P deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitotriose deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitotriose-6P deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; TaxID=546 species="Bacteria; Proteobacteri
UPF0249 protein H262_00100 n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DW03_CITFR
hypothetical protein; K03478 hypothetical protein
64_003_scaffold_77_81
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80146..82404)
-----------------
DNA (2259bp)
protein (753aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
katE; hydroperoxidase II (EC:1.11.1.6); K03781 catalase [EC:1.11.1.6]
Catalase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DUQ8_CITFR
64_003_scaffold_77_82
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82924..84315)
-----------------
DNA (1392bp)
protein (464aa)
L-cystine uptake protein tcyP Transporter of cystine tcyP n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BNH4_CITFR
L-cystine transporter tcyP {ECO:0000313|EMBL:KJC12559.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
sodium:dicarboxylate symporter family protein
64_003_scaffold_77_83
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84451..85038)
-----------------
DNA (588bp)
protein (196aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R1FI89_CITFR
Inner membrane protein ydjM {ECO:0000313|EMBL:ETX70661.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
ydjM; hypothetical protein; K07038 inner membrane protein
64_003_scaffold_77_84
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85134..85895)
-----------------
DNA (762bp)
protein (254aa)
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:KEL82327.1}; EC=1.1.1.125 {ECO:0000313|EMBL:KEL82327.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein; K00065 2-deoxy-D-gluconate 3-dehydrogenase [EC:1.1.1.125]
Uncharacterized protein n=3 Tax=Citrobacter RepID=K8QUC1_CITFR
64_003_scaffold_77_85
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86043..86711)
-----------------
DNA (669bp)
protein (223aa)
Phosphatase YniC n=3 Tax=Citrobacter RepID=J1FXI9_9ENTR
2-deoxyglucose-6-phosphatase {ECO:0000313|EMBL:KJC12556.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
2-deoxyglucose-6-phosphatase
64_003_scaffold_77_86
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86852..87415
-----------------
DNA (564bp)
protein (188aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M3V1_9ENTR
Regulatory protein {ECO:0000313|EMBL:ETX64583.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
64_003_scaffold_77_87
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87480..88340)
-----------------
DNA (861bp)
protein (287aa)
Phosphotransferase kinase n=4 Tax=Citrobacter RepID=J0LZN1_9ENTR
Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation {ECO:0000313|EMBL:CDL39952.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
64_003_scaffold_77_88
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88610..89539)
-----------------
DNA (930bp)
protein (310aa)
pfkB; 1-phosphofructokinase PfkB; K00850 6-phosphofructokinase [EC:2.7.1.11]
Phosphofructokinase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3D6H9_CITFR
Phosphofructokinase {ECO:0000256|PIRNR:PIRNR000535}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
64_003_scaffold_77_89
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89827..90585
-----------------
DNA (759bp)
protein (253aa)
Uncharacterized protein n=2 Tax=Citrobacter freundii RepID=K8QUC3_CITFR
Membrane protein {ECO:0000313|EMBL:KJC12552.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein; K07283 putative salt-induced outer membrane protein
64_003_scaffold_77_90
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90750..90857)
-----------------
DNA (108bp)
protein (36aa)
Transmembrane anchor protein n=9 Tax=Citrobacter RepID=J1FXJ4_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX64587.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
yniD; hypothetical protein
Displaying items 61-90 of 190 in total

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