ggKbase home page

64_003_scaffold_77

Search features with annotation key words

Displaying items 151-180 of 190 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_003_scaffold_77_151
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159108..160130)
-----------------
DNA (1023bp)
protein (341aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UU57_9ENTR
Tetrathionate reductase subunit C {ECO:0000313|EMBL:KJC12493.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
tetrathionate reductase complex subunit C; K08359 tetrathionate reductase subunit C
64_003_scaffold_77_152
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160131..160865)
-----------------
DNA (735bp)
protein (245aa)
Tetrathionate reductase subunit B n=2 Tax=Citrobacter freundii RepID=K8QV72_CITFR
Tetrathionate reductase subunit B {ECO:0000313|EMBL:KJC09286.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
tetrathionate reductase subunit B; K08358 tetrathionate reductase subunit B
64_003_scaffold_77_153
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

161045..162826
-----------------
DNA (1782bp)
protein (594aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UT98_9ENTR
histidine kinase
64_003_scaffold_77_154
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

162801..163385
-----------------
DNA (585bp)
protein (195aa)
Response regulator n=2 Tax=Citrobacter freundii RepID=K8R370_CITFR
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:KEL82182.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
response regulator
64_003_scaffold_77_155
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

163478..163687
-----------------
DNA (210bp)
protein (70aa)
Uncharacterized protein n=11 Tax=Citrobacter RepID=C1M414_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EOQ49584.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
ydhZ; hypothetical protein
64_003_scaffold_77_156
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164169..164795
-----------------
DNA (627bp)
protein (209aa)
Uncharacterized protein n=9 Tax=Enterobacteriaceae RepID=C1M415_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC09290.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_003_scaffold_77_157
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164915..167017
-----------------
DNA (2103bp)
protein (701aa)
Aldehyde ferredoxin domain 2 3 n=5 Tax=Citrobacter RepID=J1FXP4_9ENTR
Aldehyde ferredoxin oxidoreductase, domains 2 & 3 family protein {ECO:0000313|EMBL:KEL82178.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
putative oxidoreductase
64_003_scaffold_77_158
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167028..167693
-----------------
DNA (666bp)
protein (222aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3D6N8_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC12486.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_003_scaffold_77_159
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167712..168425
-----------------
DNA (714bp)
protein (238aa)
4Fe-4S ferridoxin-type protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UV16_9ENTR
4Fe-4S ferridoxin-type protein {ECO:0000313|EMBL:ETX70727.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_003_scaffold_77_160
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168422..169207
-----------------
DNA (786bp)
protein (262aa)
Thiosulfate reductase cytochrome b subunit n=5 Tax=Citrobacter RepID=J1FXH2_9ENTR
Prokaryotic cytochrome b561 family protein {ECO:0000313|EMBL:KEL82175.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein; K08354 thiosulfate reductase cytochrome b subunit
64_003_scaffold_77_161
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

169211..170023
-----------------
DNA (813bp)
protein (271aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R780_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC09294.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_003_scaffold_77_162
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170033..170710)
-----------------
DNA (678bp)
protein (226aa)
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=3 Tax=Citrobacter RepID=J1FXP9_9ENTR
Amino acid ABC transporter permease {ECO:0000313|EMBL:KJC09295.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_003_scaffold_77_163
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170700..171485)
-----------------
DNA (786bp)
protein (262aa)
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=3 Tax=Citrobacter RepID=J0VL67_9ENTR
Membrane protein {ECO:0000313|EMBL:KJC12482.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein; K02029 polar amino acid transport system permease protein
64_003_scaffold_77_164
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171485..172303)
-----------------
DNA (819bp)
protein (273aa)
hypothetical protein; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]
Glutamine abc atp-binding protein n=5 Tax=Citrobacter RepID=J0LZS7_9ENTR
ABC transporter {ECO:0000313|EMBL:KJC12481.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
64_003_scaffold_77_165
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172305..172463)
-----------------
DNA (159bp)
protein (53aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DUX7_CITFR
Bacterial extracellular solute-binding s, 3 family protein {ECO:0000313|EMBL:KEL82170.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
64_003_scaffold_77_166
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172557..173138)
-----------------
DNA (582bp)
protein (194aa)
Cysteine transporter n=3 Tax=Citrobacter RepID=J1FXH7_9ENTR
Cystine-binding protein {ECO:0000313|EMBL:CDL40339.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
64_003_scaffold_77_167
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173444..174337
-----------------
DNA (894bp)
protein (298aa)
Family transcriptional regulator n=3 Tax=Citrobacter RepID=J0LTN2_9ENTR
Transcriptional regulator YcjZ {ECO:0000313|EMBL:ETX70734.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
LysR family transcriptional regulator
64_003_scaffold_77_168
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174388..174528)
-----------------
DNA (141bp)
protein (47aa)
Uncharacterized protein n=6 Tax=Enterobacteriaceae RepID=D4BA50_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEL82169.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
64_003_scaffold_77_169
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174861..176342
-----------------
DNA (1482bp)
protein (494aa)
Amino acid transporter n=4 Tax=Citrobacter RepID=J1FXQ4_9ENTR
Amino acid permease {ECO:0000313|EMBL:KJC09299.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
amino acid permease
64_003_scaffold_77_170
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176364..177062)
-----------------
DNA (699bp)
protein (233aa)
Uncharacterized protein n=4 Tax=Citrobacter RepID=J0VL72_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC09300.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_003_scaffold_77_171
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(177087..177812)
-----------------
DNA (726bp)
protein (242aa)
GntR-family transcriptional regulator n=5 Tax=Citrobacter RepID=J0LZT3_9ENTR
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:KEL82165.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
regulatory protein GntR HTH
64_003_scaffold_77_172
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

178128..179555
-----------------
DNA (1428bp)
protein (476aa)
aldehyde dehydrogenase; K00130 betaine-aldehyde dehydrogenase [EC:1.2.1.8]
Aldehyde dehydrogenase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DW91_CITFR
Phenylacetaldehyde dehydrogenase {ECO:0000313|EMBL:KJC09302.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
64_003_scaffold_77_173
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

179567..180040
-----------------
DNA (474bp)
protein (158aa)
Uncharacterized protein n=4 Tax=Citrobacter RepID=J0LTN7_9ENTR
SnoaL-like domain protein {ECO:0000313|EMBL:KEL82163.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
64_003_scaffold_77_174
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

180130..182022
-----------------
DNA (1893bp)
protein (631aa)
twin-arginine translocation pathway signal; K00316 spermidine dehydrogenase [EC:1.5.99.6]
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UU22_9ENTR
Spermidine dehydrogenase {ECO:0000313|EMBL:KJC09304.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
64_003_scaffold_77_175
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

182026..183234
-----------------
DNA (1209bp)
protein (403aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UTB8_9ENTR
Putative diheme cytochrome c-553 {ECO:0000313|EMBL:CDL40352.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
cytochrome c, class I
64_003_scaffold_77_176
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183278..184753)
-----------------
DNA (1476bp)
protein (492aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UV32_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX70743.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
GntR family transcriptional regulator; K00375 GntR family transcriptional regulator / MocR family aminotransferase
64_003_scaffold_77_177
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184860..186122
-----------------
DNA (1263bp)
protein (421aa)
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:KJC12471.1}; EC=2.6.1.19 {ECO:0000313|EMBL:KJC12471.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
gabT1; 4-aminobutyrate transaminase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19]
4-aminobutyrate transaminase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DW93_CITFR
64_003_scaffold_77_178
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

186303..187358
-----------------
DNA (1056bp)
protein (352aa)
Abc-transporter periplasmic-binding component n=4 Tax=Citrobacter RepID=J0VL83_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC12470.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Iron(III) ABC transporter, solute-binding protein
64_003_scaffold_77_179
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

187345..188349
-----------------
DNA (1005bp)
protein (335aa)
Abc transporter permease n=3 Tax=Citrobacter RepID=J0LZU3_9ENTR
ABC transporter permease {ECO:0000313|EMBL:KJC12469.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ABC-type Fe3+-siderophore transport system
64_003_scaffold_77_180
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

188346..188675
-----------------
DNA (330bp)
protein (110aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
Cobalamin/Fe3+-siderophores ABC transporter ATPase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QWX3_CITFR
ABC transporter {ECO:0000313|EMBL:KJC12468.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Displaying items 151-180 of 190 in total

View Taxonomy