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gwc1_scaffold_4976

Alias: GWC1_OD1_44_26_partial_9

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_4976_1

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comp(83..826)
-----------------
DNA (744bp)
protein (248aa)
processing peptidase (EC:3.4.24.64)
Peptidase M16 domain protein {ECO:0000313|EMBL:KKT60578.1}; TaxID=1618913 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_26.;"
Peptidase M16 domain protein
gwc1_scaffold_4976_2
GWA1_OD1_44_13, Parcubacteria, Bacteria

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comp(1214..1567)
-----------------
DNA (354bp)
protein (118aa)
Tax=GWA1_OD1_44_13
gwc1_scaffold_4976_3
GWA1_OD1_44_13, Parcubacteria, Bacteria

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comp(1614..2576)
-----------------
DNA (963bp)
protein (321aa)
glyQS; Glycine--tRNA ligase (EC:6.1.1.14)
tde:TDE0020 glyS; glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] alias=ACD81_2969.98551.54_10,ACD81_2969.98551.54G0010,ACD81_C00011G00010 id=133269 tax=ACD81 species=Treponema denticola genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_group=OD1, not OD1-i organism_desc=OD1
Glycine-tRNA ligase {ECO:0000313|EMBL:KKT37823.1}; TaxID=1618788 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_44_13.;"
gwc1_scaffold_4976_4

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comp(2573..2914)
-----------------
DNA (342bp)
protein (114aa)
Glycyl-tRNA synthetase, glycyl-tRNA synthetase {ECO:0000313|EMBL:KKT60581.1}; EC=6.1.1.14 {ECO:0000313|EMBL:KKT60581.1};; TaxID=1618913 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacter
tde:TDE0020 glyS; glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] alias=ACD81_2969.98551.54_10,ACD81_2969.98551.54G0010,ACD81_C00011G00010 id=133269 tax=ACD81 species=Treponema denticola genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_group=OD1, not OD1-i organism_desc=OD1
glycyl-tRNA synthetase
Suspect SCG annotation. See neighboring gene [gwc1_scaffold_4976_3].
gwc1_scaffold_4976_5
GWA1_OD1_44_13, Parcubacteria, Bacteria

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comp(2921..4831)
-----------------
DNA (1911bp)
protein (637aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT37822.1}; TaxID=1618788 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_44_13.;"
Putative uncharacterized protein
gwc1_scaffold_4976_6
GWA1_OD1_44_13, Parcubacteria, Bacteria

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comp(4854..5441)
-----------------
DNA (588bp)
protein (196aa)
Repair protein RecO protein {ECO:0000313|EMBL:KKT37821.1}; TaxID=1618788 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_44_13.;"
reco: DNA repair protein RecO
DNA repair protein RecO
gwc1_scaffold_4976_7
GWA1_OD1_44_13, Parcubacteria, Bacteria

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comp(5499..8990)
-----------------
DNA (3492bp)
protein (1164aa)
Isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine-tRNA ligase {ECO:0000313|EMBL:KKT37820.1}; TaxID=1618788 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_44_13.;"
Isoleucine--tRNA ligase
gwc1_scaffold_4976_8

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comp(9134..9715)
-----------------
DNA (582bp)
protein (194aa)
Seg {ECO:0000313|EMBL:KKT60585.1}; TaxID=1618913 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_26.;"
seg 101..111 alias=ACD11_12498.357805.29G0217,ACD11_12498.357805.29_217,ACD11_C00006G00217 id=2682 tax=ACD11 species=OD1-i genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_4976_9
GWA1_OD1_44_13, Parcubacteria, Bacteria

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comp(9902..10798)
-----------------
DNA (897bp)
protein (299aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT37818.1}; TaxID=1618788 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_44_13.;"
Displaying 9 items

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