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gwc1_scaffold_1786

Alias: GWC1_OD1_39_8_partial_3

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_1786_1
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

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comp(1..708)
-----------------
DNA (708bp)
protein (236aa)
ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
ATP-dependent DNA helicase PcrA {ECO:0000313|EMBL:KKR30946.1}; Flags: Fragment;; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
ATP-dependent DNA helicase PcrA
gwc1_scaffold_1786_2
Parcubacteria bacterium GW2011_GWB1_38_8, Parcubacteria, Bacteria

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1055..1912
-----------------
DNA (858bp)
protein (286aa)
Peptidase M23 family protein {ECO:0000313|EMBL:KKQ83454.1}; TaxID=1618864 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_38_8.;"
peptidase M23 family protein
Peptidase M23 family protein
gwc1_scaffold_1786_3
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

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comp(1947..3494)
-----------------
DNA (1548bp)
protein (516aa)
Mg chelatase-like protein; K07391 magnesium chelatase family protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
Mg chelatase-like protein
Mg chelatase-related protein
gwc1_scaffold_1786_4
Parcubacteria bacterium GW2011_GWB1_38_8, Parcubacteria, Bacteria

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comp(3491..3850)
-----------------
DNA (360bp)
protein (120aa)
Binding protein, DksA/TraR protein {ECO:0000313|EMBL:KKQ83456.1}; TaxID=1618864 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_38_8.;"
hypothetical protein
DNA binding protein, DksA/TraR
gwc1_scaffold_1786_5
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

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comp(3879..4781)
-----------------
DNA (903bp)
protein (301aa)
transmembrane_regions Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
gwc1_scaffold_1786_6
Parcubacteria bacterium GW2011_GWB1_38_8, Parcubacteria, Bacteria

Not on your lists

comp(4800..5339)
-----------------
DNA (540bp)
protein (180aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ83458.1}; TaxID=1618864 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_38_8.;"
hypothetical protein
Putative uncharacterized protein
gwc1_scaffold_1786_7
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists


comp(5457..5723)
-----------------
DNA (267bp)
protein (89aa)
SSU ribosomal protein S15P Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
SSU ribosomal protein S15P
30S ribosomal protein S15
gwc1_scaffold_1786_8
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

5878..6759
-----------------
DNA (882bp)
protein (294aa)
Tyrosine recombinase XerC {ECO:0000313|EMBL:KKR30953.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
putative Tyrosine recombinase xerD
Tyrosine recombinase XerC
gwc1_scaffold_1786_9
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

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6841..8028
-----------------
DNA (1188bp)
protein (396aa)
NusA antitermination factor; K02600 N utilization substance protein A Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
NusA antitermination factor
NusA antitermination factor
gwc1_scaffold_1786_10
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

8060..8587
-----------------
DNA (528bp)
protein (176aa)
ppa; inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000313|EMBL:KKR30955.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
Inorganic pyrophosphatase
gwc1_scaffold_1786_11
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

8651..9409
-----------------
DNA (759bp)
protein (253aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR30956.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
hypothetical protein
Uncharacterized protein
gwc1_scaffold_1786_12
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

9432..9719
-----------------
DNA (288bp)
protein (96aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
gwc1_scaffold_1786_13
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

9793..10368
-----------------
DNA (576bp)
protein (192aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit
gwc1_scaffold_1786_14
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

10477..12006
-----------------
DNA (1530bp)
protein (510aa)
Ribonuclease Y {ECO:0000313|EMBL:KKR30959.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
2,3 cyclic-nucleotide 2-phosphodiesterase
Ribonuclease Y
gwc1_scaffold_1786_15
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

12155..12427
-----------------
DNA (273bp)
protein (91aa)
Histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
Histone-like DNA-binding protein
Histone-like DNA-binding protein
gwc1_scaffold_1786_16
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

comp(12487..13962)
-----------------
DNA (1476bp)
protein (492aa)
PolyA polymerase {ECO:0000313|EMBL:KKR30961.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
polyA polymerase
PolyA polymerase
gwc1_scaffold_1786_17
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(14018..14533)
-----------------
DNA (516bp)
protein (172aa)
putative General secretion pathway protein GspG Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
putative General secretion pathway protein GspG
Putative uncharacterized protein
gwc1_scaffold_1786_18
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

14729..15013
-----------------
DNA (285bp)
protein (95aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
gwc1_scaffold_1786_19
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

15021..15581
-----------------
DNA (561bp)
protein (187aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
Type II secretion system protein G
Predicted secretion system X protein GspG-like3
Displaying 19 items

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