ggKbase home page

scnpilot_solids1_trim150_scaffold_5285_curated_1

Organism: solids_Burkholderiales_2

partial RP 32 / 55 BSCG 32 / 51 MC: 1 ASCG 10 / 38
Location: comp(3..500)

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Acidovorax sp. (strain JS42) RepID=TTCA_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 162.0
  • Bit_score: 266
  • Evalue 1.60e-68
C32 tRNA thiolase; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 162.0
  • Bit_score: 266
  • Evalue 5.00e-69
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000255|HAMAP-Rule:MF_01850}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 162.0
  • Bit_score: 266
  • Evalue 2.20e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGGACACCCTCGAAGCCATCGCCCCCGTGAACTCTCGCGACACTCGCAGGGCCGATCACGAAGACCACAAGCTCGAAAAGCGCCTGTGCCGCGAAGTCGGCCGCGCCATCATCGACTATTCGATGATCGAGGAAGGCGACAAGGTCATGGTCTGCCTGTCGGGCGGCAAGGACAGCTATACCCTGCTCGACATTCTGCTGAAGCTGCAAAAGCGCGCTCCGATCTCGTTCAGCATCGTCGCGGTGAACCTCGATCAGAAGCAGCCGGGCTTTCCCGAGCACGTGCTGCCCGAATACCTGAGCCGCATCGGCGTGGATTTCCACATCGAGAACCAGGACACCTACAGCGTCGTGAAACGACTTGTGCCCGAGGGCAAGACCACGTGCAGCGTCTGCTCGCGCCTGCGCCGCGCCATCCTCTACCGCGTGGCGACCGAGCTGGGCGCCACCAAGGTGGCGCTGGGCCACCACCGCGACGACATCGTCACCACGCTGATG
PROTEIN sequence
Length: 166
MDTLEAIAPVNSRDTRRADHEDHKLEKRLCREVGRAIIDYSMIEEGDKVMVCLSGGKDSYTLLDILLKLQKRAPISFSIVAVNLDQKQPGFPEHVLPEYLSRIGVDFHIENQDTYSVVKRLVPEGKTTCSVCSRLRRAILYRVATELGATKVALGHHRDDIVTTLM