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scnpilot_solids1_trim150_scaffold_404_curated_29

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(32056..32613)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 182.0
  • Bit_score: 230
  • Evalue 1.50e-57
shikimate kinase (EC:2.7.1.71) similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 182.0
  • Bit_score: 223
  • Evalue 4.10e-56
Shikimate kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJJ7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 182.0
  • Bit_score: 230
  • Evalue 1.10e-57

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGAATCCGGCCTGCAACATCTTCATCATTGGCCCTACCGGCGCCGGCAAGAGTTCGCTCGGGCGGCGCCTCGGCGCGCACTATGGCCGTCCATTCGTCGACCTCGACCAGGAAATCGAGCAGCGCGCCGGGGTCAGCACCAGCGTGGTGTTCGACATCGAGGGCGAGGCCGGCTTCCGCAAGCGCGAGGCGGCACTGCTGGAAAGCTGCAGCCAGTGCCAGGGCATCGTCATGGCCACCGGTGCCGGCGCGGTCCTCGACGCCGCCAATCGTGAGCACCTGGCCGCCAGGGGTTTCGTGGTCTGGCTGCAGGCCAGCATCGACCAACAACTCCAGCGCCTGCGCATGGACCGCAGTCGCCCGCTGCTGGCCGGCGACGACCGCCGCCAGCGCTTGCAGGCCATGGCAGCCGAGCGCGAGCCGCTGTACCAATCCATCGCCGACCTGGTCGTCGCCAGCGCAACGGACAACCTGGCCACGGTGGGCGCACGCTGTATCGACCTGCTCGATGCGCGCTGGGTGCAGGCAGACGCTGTCGAGGGGCAACGCCAGGCATGA
PROTEIN sequence
Length: 186
MNPACNIFIIGPTGAGKSSLGRRLGAHYGRPFVDLDQEIEQRAGVSTSVVFDIEGEAGFRKREAALLESCSQCQGIVMATGAGAVLDAANREHLAARGFVVWLQASIDQQLQRLRMDRSRPLLAGDDRRQRLQAMAAEREPLYQSIADLVVASATDNLATVGARCIDLLDARWVQADAVEGQRQA*