ggKbase home page
This organism can only be binned in the context of its binning project CG10_big_fil_rev_8_21_14_0_10. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

scnpilot_solids1_trim150_scaffold_9220_curated_4

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(1657..3501)

Top 3 Functional Annotations

Value Algorithm Source
Multidrug ABC transporter ATPase/permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6D3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 614.0
  • Bit_score: 1182
  • Evalue 0.0
Multidrug ABC transporter ATPase/permease {ECO:0000313|EMBL:EIL95024.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 614.0
  • Bit_score: 1182
  • Evalue 0.0
ABC-type multidrug transport system, ATPase and permease component similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 612.0
  • Bit_score: 1124
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1845
ATGATTTTTCGCTGGTTCGAGTCCCTCATCGACGCGTTCAAGGAACCCGTCGACGGCATGCCGCCGCAGTCGGTGTGGCGCTTCTACGCGTTCTACCTGCGCCAGGTGTGGCCGGTGTTCGCGGTGGCGATCGTGCTGGGTTTCGTGGTGGCGATCATCGAGGTGTCGCTGTTCGGCTTCATCGGCAGCATCGTGGACATGGCCCGGGGCGCGCCGCCGGCAGATTTCTTCCGGCAGCACGGCAACGAACTGCTGTGGATGGGCTTCGTGGCGCTGATCGCGCGACCGCTGGCGATCGGTGCGCACGACCTGCTGGTGAACCAGGCCATCGTGCCCAGCCTGACCAATCGCATCCGCTGGCAGAACCATCGCTACGTGATCCGCCAGAGCCTGGGCTTCTTCCAGAACGACTTCGCCGGGCGCATCGCCAACCGCATCATGCAGACCGGCGGTGCGCTGCGCGAATCGGCGGTGCAGATCGTCGATGCGATCTGGTACGTCACCATCTATACCGGCAGCGCCATCGTGCTGTTTGCCCAGGCGGATTTCTGGCTGGCCGCGCCGCTGTTTGCCTGGGTGTTCGCCTATGTGGGTCTGCTGGCGTTCTTCGTGCCTCGGCTGAAGCAGCGCTCGTGGAAGGCCTCGGAGGCGCGCTCGAAACTGATGGGCCGGATCGTGGACGGCTACAGCAACGTGCTGACGCTGAAGCTGTTCGCCCATACGCGGCGCGAGGAAGCCTACGTGGCCGAGGCGATGATGGAGCAGACCGACAAGCTGCGCCGGATGACCCGCATCACCACCGCACTGGACGTCAGCATCACCACCCTCAACGGCTTTCTGATCGTGGGCACTTCGGCGCTGGCGCTGTGGCTGTGGAGCGAGGGGCGGGTGACGGTGGGCGCGATCGCGCTGTCGACCGGGCTGGTGATCCGCATCAACAACATGTCCGGCTGGATCATGTGGGTGGTCAACGGCATCTTCGAGGATGTGGGCACGGTGCAGGACGGCATCACCACCATCGCCCAGCCGCGCGCGGTGCAGGATCGCGACGACGCGGTGCCGCTGGCGGTGACCGACGGCGTAGTGCGCTTCGAGCAGATCCATTTCCACTACGGCAAGCAGGGCGGGGTGATCGCCGGGCTCGACCTGGCCGTGCGCGCGGGCGAGAAGATCGGCGTGGTCGGGCCGTCCGGTGCGGGCAAGTCCACCCTGGTCAACGTGCTGCTGCGGCTGTATGACCTCGAGGCCGGGCGCATCCAGATCGACGGCCAGGACATCGCCCGCGTCACCCAGGAAAGCCTGCGTTCGCAGATCGGCGTGGTCACCCAGGACACCTCGCTGCTGCATCGCTCGATCCGCGACAACCTGTTGTATGGACGTCCGGACGCCAGCGAGGCGCAGGTTGCCGAAGCGGTGCGCAAGGCCCGCGCCGACGAGTTCATTCCGAACCTCAGCGACGGCGAGGGCCGCCGCGGCTACGACGCCCTGGTCGGCGAGCGCGGCGTGAAGCTTTCGGGCGGCCAGCGCCAGCGCATCGCGATCGCCCGCGTGCTGCTGAAGGATGCGCCGATCCTGGTGCTGGACGAGGCCACCAGCGCACTCGACTCCGAGGCGGAAGCGGCGATCCAGGAAAGTCTTGACCTGCTGATGCAGGGCAAGACGGTGATCGCCATCGCCCATCGTCTGTCCACCATCGCCCGGATGGACCGGCTGGTGGTGCTGGACAAGGGGCAGGTCGTCGAAACCGGCACGCACGCCGAGCTGATCGCGCGCGAGGGTTTGTACGCGCGGCTGTGGAAACGACAGACTGGCGGTTTCGTGGCCGCGGAGGATGCGCCGGCCTAG
PROTEIN sequence
Length: 615
MIFRWFESLIDAFKEPVDGMPPQSVWRFYAFYLRQVWPVFAVAIVLGFVVAIIEVSLFGFIGSIVDMARGAPPADFFRQHGNELLWMGFVALIARPLAIGAHDLLVNQAIVPSLTNRIRWQNHRYVIRQSLGFFQNDFAGRIANRIMQTGGALRESAVQIVDAIWYVTIYTGSAIVLFAQADFWLAAPLFAWVFAYVGLLAFFVPRLKQRSWKASEARSKLMGRIVDGYSNVLTLKLFAHTRREEAYVAEAMMEQTDKLRRMTRITTALDVSITTLNGFLIVGTSALALWLWSEGRVTVGAIALSTGLVIRINNMSGWIMWVVNGIFEDVGTVQDGITTIAQPRAVQDRDDAVPLAVTDGVVRFEQIHFHYGKQGGVIAGLDLAVRAGEKIGVVGPSGAGKSTLVNVLLRLYDLEAGRIQIDGQDIARVTQESLRSQIGVVTQDTSLLHRSIRDNLLYGRPDASEAQVAEAVRKARADEFIPNLSDGEGRRGYDALVGERGVKLSGGQRQRIAIARVLLKDAPILVLDEATSALDSEAEAAIQESLDLLMQGKTVIAIAHRLSTIARMDRLVVLDKGQVVETGTHAELIAREGLYARLWKRQTGGFVAAEDAPA*