ggKbase home page

scnpilot_solids1_trim150_scaffold_240_curated_9

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(11316..11873)

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 184.0
  • Bit_score: 341
  • Evalue 2.30e-91
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 185.0
  • Bit_score: 383
  • Evalue 1.30e-103
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EIL93299.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 185.0
  • Bit_score: 383
  • Evalue 1.80e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGAAGGTGATCCAGACCAGCCTGCCCGGCGCGCTGATCCTCGAACCGCAGGTGTTCGGCGATGCCCGCGGGTTCTTCTACGAAAGCTACAACGAGGCGAAGTACCAGGAGGCCGGCGTCGACCACCGCTTCGTGCAGTCCAACGTGTCGCGCTCGGCGCGCGGCGTGTTGCGCGGCCTGCATTACCAGTGGCCGAATCCGCAGGGCAAGCTGGTCAGCGTGCTCGAAGGCGAGGTCTACGACGTGGCGGTGGACATCCGCCGCGGCTCGCCCACCTTCGGGCAGTCGATCGGCGTGATGCTGACGGCCGACAACCATCGTCATTTCTGGGTGCCTGAAGGCTTCGCGCACGGCTTCTGCGTGTTGTCCGAGTTCGCCACCTTCAGCTACCAGTGCACCGCGCTGTATGACCCCAGGGCCGACGCGGGCATCCGCTGGAACGACGCCGCGCTCGGCATCGACTGGCCGATCAGCGCGCCGCTGCTGTCGGACAAGGACGGCAAGACGCCCCTGCTCGCCGACGTGCCAGCGGAGCGCCTGCCGGTCTACGTGGCATGA
PROTEIN sequence
Length: 186
MKVIQTSLPGALILEPQVFGDARGFFYESYNEAKYQEAGVDHRFVQSNVSRSARGVLRGLHYQWPNPQGKLVSVLEGEVYDVAVDIRRGSPTFGQSIGVMLTADNHRHFWVPEGFAHGFCVLSEFATFSYQCTALYDPRADAGIRWNDAALGIDWPISAPLLSDKDGKTPLLADVPAERLPVYVA*